PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_12055
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family TALE
Protein Properties Length: 263aa    MW: 30225.2 Da    PI: 6.4268
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_12055genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.92e-092012381954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yps +e+  LA+k+gLt +q+++WF N R +
  PEQU_12055 201 FEHflHPYPSDNEKLLLASKTGLTRNQISNWFINARVR 238
                 664459******************************98 PP
2BELL72.76e-2480147471
        BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeq 71 
                 e  ++++kLl l+ee++kr k y +q+  +++sFeav g gsa+ Yt+l  +a+S+hF +L++ i ++
  PEQU_12055  80 EEMSRINKLLALQEELEKRQKIYFHQMDELVASFEAVGGPGSAATYTALTTQAMSKHFSNLRESILSH 147
                 56789************************************************************886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005747.5E-1821146IPR006563POX domain
PfamPF075263.1E-2827144IPR006563POX domain
PROSITE profilePS5007111.726179242IPR001356Homeobox domain
CDDcd000862.52E-11182243No hitNo description
SMARTSM003891.5E-9182246IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.6E-27187248IPR009057Homeodomain-like
SuperFamilySSF466892.91E-17188248IPR009057Homeodomain-like
PfamPF059202.2E-17199238IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MVCDQDVDSN NYTLSCLNSA APFIDGLQKS PYLKAARELL DEVVCVSNKS VVEPSSEKNA  60
QRKNQIKGNS HNAQLSWEEE EMSRINKLLA LQEELEKRQK IYFHQMDELV ASFEAVGGPG  120
SAATYTALTT QAMSKHFSNL RESILSHMDS SREAFPKDGS KNHKPKRESL QHLGMIHVRQ  180
IWRPLRGLPE DSVMVLRAWL FEHFLHPYPS DNEKLLLASK TGLTRNQISN WFINARVRLW  240
KPMIEEMYKE EFAEEQEDSN PSF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A2e-16188246563Homeobox protein Meis2
4xrm_B2e-16188246563Homeobox protein Meis2
5bng_A2e-16188246159Homeobox protein Meis2
5bng_B2e-16188246159Homeobox protein Meis2
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020580092.10.0BEL1-like homeodomain protein 11
RefseqXP_020580093.10.0BEL1-like homeodomain protein 11
RefseqXP_020580094.10.0BEL1-like homeodomain protein 11
RefseqXP_020580095.10.0BEL1-like homeodomain protein 11
RefseqXP_020580096.10.0BEL1-like homeodomain protein 11
RefseqXP_020580098.10.0BEL1-like homeodomain protein 11
RefseqXP_020580099.10.0BEL1-like homeodomain protein 11
TrEMBLA0A2I0WHD11e-143A0A2I0WHD1_9ASPA; BEL1-like homeodomain protein 6
STRINGXP_008794021.12e-97(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP77153146
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16400.18e-69BEL1-like homeodomain 7