PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_12007

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 353aa MW: 39183.7 Da PI: 8.1985

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_12007	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.1	4.1e-05	242	276	16	55
HHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 16 iNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + +++ L++++ + +K++ a++L +A++YI+ Lq PEQU_12007 242 VADKITALQQIVSPF-----GKVDTASVLLEAINYIRFLQ 276 668999999999998.....8******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50888	10.093	226	275	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	4.32E-9	241	288	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.0E-8	242	284	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	2.19E-5	244	280	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence Send to blast
MFNPVCDYLK KLDSSNWEFS KSSSSLNSFE KQFNSYNGED LIDSERLTSN LSDLVSNWSI 60 APPNPNVDHQ QISPSSCNVS MDPNVMAYTT SHVSHMKHEN SGLSSFPNFQ SYVHEVMKGD 120 HYQQHELGEF SFGGLNNSVI GLNNSGLMAD APWSIPRNLS DIISFGSLNN ACMKSSVSSE 180 SSKKAGLESY SSTKGSGRGS GTTSEGKKKR TDQYSSEALF KKPKHESSSA SPLKLQVPKV 240 KVADKITALQ QIVSPFGKVD TASVLLEAIN YIRFLQEQVQ LLSDPYLKSS TNKVQQKDHS 300 SWGSMERKEK VESKLDLRSR GLCLVPISST PQAYRENNGP DYWTPPYRGC LYR

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence Send to blast

MFNPVCDYLK KLDSSNWEFS KSSSSLNSFE KQFNSYNGED LIDSERLTSN LSDLVSNWSI  60
APPNPNVDHQ QISPSSCNVS MDPNVMAYTT SHVSHMKHEN SGLSSFPNFQ SYVHEVMKGD  120
HYQQHELGEF SFGGLNNSVI GLNNSGLMAD APWSIPRNLS DIISFGSLNN ACMKSSVSSE  180
SSKKAGLESY SSTKGSGRGS GTTSEGKKKR TDQYSSEALF KKPKHESSSA SPLKLQVPKV  240
KVADKITALQ QIVSPFGKVD TASVLLEAIN YIRFLQEQVQ LLSDPYLKSS TNKVQQKDHS  300
SWGSMERKEK VESKLDLRSR GLCLVPISST PQAYRENNGP DYWTPPYRGC LYR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020578877.1	0.0	transcription factor bHLH111 isoform X1
TrEMBL	A0A2H3ZAX3	1e-125	A0A2H3ZAX3_PHODC; transcription factor bHLH110
STRING	XP_008811082.1	1e-126	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7169	7	9

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	1e-43	bHLH family protein