PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_11715

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

TCP

Protein Properties

Length: 288aa MW: 32832.4 Da PI: 8.7894

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_11715	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	130.2	2.1e-40	70	197	2	132
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt..ssssaseceaesssssasnsssgkaaksaaksk 98 + +kdrh+ki+T++g+RdRR+Rls+++a++fFdLqd L fdk+s+t++WLl+++k+aike + + s sec +++ssa ++ k+++ aa + PEQU_11715 70 PLRKDRHKKIYTAKGPRDRRMRLSLDVARKFFDLQDLLAFDKASNTVQWLLNKSKAAIKEHMAEskGKVSTSEC---EERSSAICEN--KRKSPAAAET 163 579*********************************************************994433333566...3333333222..2333333677 PP TCP 99 ksqksaasalnlakesrakarararertrekmri 132 k++k+++++l +a+e r karararert ek+++ PEQU_11715 164 KASKRTTAMLRVARECRDKARARARERTLEKKKK 197 777777779*****************999876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	2.9E-33	72	197	IPR005333	Transcription factor, TCP
PROSITE profile	PS51369	33.312	72	130	IPR017887	Transcription factor TCP subgroup
PROSITE profile	PS51370	10.105	177	194	IPR017888	CYC/TB1, R domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:2000032	Biological Process	regulation of secondary shoot formation
GO:0005634	Cellular Component	nucleus

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence Send to blast
MLRTMFPQSN DIYSSFFPFS PPTLNYGSLH DIFSFSTSAA AENNPPEPSQ LLPAEAIAAP 60 EKTASSRTRP LRKDRHKKIY TAKGPRDRRM RLSLDVARKF FDLQDLLAFD KASNTVQWLL 120 NKSKAAIKEH MAESKGKVST SECEERSSAI CENKRKSPAA AETKASKRTT AMLRVARECR 180 DKARARARER TLEKKKKMMM IQCYEQLEGR EGNQEPHELI MKSSLQNLAE MKEQCFITSH 240 INHEELSGDG SIAICGYNDN VETFFQDQRD MIFTENIDEI VLLGELLR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020591342.1	0.0	transcription factor TCP12-like
TrEMBL	A0A1D6ZNI0	0.0	A0A1D6ZNI0_PHAEQ; TCP transcription factor

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP7253	36	51

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18550.2	7e-26	TCP family protein