PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_11635

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 275aa MW: 29365.6 Da PI: 8.317

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_11635	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	126.8	6.5e-40	28	88	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e+ lkcprCds ntkfCyynnysl+qPr+fCk+CrryWtkGGalrnvPvGgg+rkn+ks+ PEQU_11635 28 PEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKSCRRYWTKGGALRNVPVGGGCRKNRKSK 88 67899*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-26	28	85	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	6.4E-33	30	86	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.562	32	86	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	34	70	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
MASEPKSSTK SSGCGGGGTG AAAGLRPPEQ GLKCPRCDSP NTKFCYYNNY SLTQPRHFCK 60 SCRRYWTKGG ALRNVPVGGG CRKNRKSKSS SSSASSSSSS LLPLNLPEPG KALTQTAMDL 120 FLPFSFGANA ATSMGGLSYN SRNSNYGSIA SSIESLSCIN QDLHWRLQQQ RMQLLFGGEL 180 GERENVVSFV NNQVVEPSCL GMAENSKGDI FGDSSGVNGT RKTSETETAW FLDGSFAIPP 240 PPTINTDVDM NNANSVSDWN GISGWSDVHN FNSLP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020580213.1	0.0	dof zinc finger protein DOF5.7-like
TrEMBL	A0A2I0VN67	1e-152	A0A2I0VN67_9ASPA; Dof zinc finger protein DOF5.7
STRING	EOX91892	3e-67	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP140	37	367

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	3e-35	TARGET OF MONOPTEROS 6