PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_11296
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB_related
Protein Properties Length: 319aa    MW: 35771.4 Da    PI: 8.2831
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_11296genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14.2e-08244292348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      +WT  E ++lv++v ++G g+W+ I +       +Rt  ++k++w+++l
       PEQU_11296 244 AWTLGEVLKLVEGVSMYGVGRWSQIRQVAFasgSHRTSVDLKDKWRNLL 292
                      7************************99998999**************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-13236298IPR009057Homeodomain-like
PROSITE profilePS5129415.938237296IPR017930Myb domain
SuperFamilySSF466891.2E-15240299IPR009057Homeodomain-like
SMARTSM007179.0E-10241294IPR001005SANT/Myb domain
CDDcd116602.45E-20243293No hitNo description
PfamPF002491.6E-6244292IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MGLTNSCDIP STNFIIKDNK IVLSDVKEKI ASGTQSNLSS PVFMAMNEST DPLNETLEET  60
LNDTSTHIEK QQASSTQELD KSLEKCNEDN FNAQTVQCGT KRIRRPTKRY IEEHSEVEVM  120
QCSGRIASLG KDDIDYRYSL KSKVRAPCLV DTSQGLFGGY DARIPCVLRV RRRPPRKNFL  180
ALVVCIIIPE VFNSEKSPQE NHVKFISSGS AAFHENSDSG SAAFHENSDT LQPMESSKKK  240
NHRAWTLGEV LKLVEGVSMY GVGRWSQIRQ VAFASGSHRT SVDLKDKWRN LLKATSAQER  300
TDKGVRISSL VFFVFQENL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020582426.10.0uncharacterized protein LOC110026023 isoform X1
RefseqXP_020582427.10.0uncharacterized protein LOC110026023 isoform X1
RefseqXP_020582429.10.0uncharacterized protein LOC110026023 isoform X1
TrEMBLA0A2I0VYX51e-134A0A2I0VYX5_9ASPA; Telomere repeat-binding protein 6
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69663341
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.21e-34TRF-like 6