PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_11207
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 580aa    MW: 63794.2 Da    PI: 7.0009
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_11207genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix513.7e-16197285186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W+++ + +L++a++e+  +l+rg+l++ +We+v+  +     +++  ++ +qCk+k +nl+kryk + ++ +++ + ++s++p+f+++e
  PEQU_11207 197 EWSDSAIGCLLDAYTEKYIQLNRGNLRGRDWEDVATTVsercDKQKSGKTVEQCKNKVDNLKKRYKVECQRLSSG-NLTVSHWPWFKKME 285
                 5*******************************998877666588899999************************9.88899********8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.6E-19195286No hitNo description
Gene3DG3DSA:3.40.1160.109.8E-67336575IPR001048Aspartate/glutamate/uridylate kinase
SuperFamilySSF536331.02E-51341575IPR001048Aspartate/glutamate/uridylate kinase
HamapMF_01220_B31.325341576IPR015963Uridylate kinase, bacteria
CDDcd042541.94E-108344576No hitNo description
PfamPF006961.1E-18344555IPR001048Aspartate/glutamate/uridylate kinase
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006221Biological Processpyrimidine nucleotide biosynthetic process
GO:0005737Cellular Componentcytoplasm
GO:0033862Molecular FunctionUMP kinase activity
Sequence ? help Back to Top
Protein Sequence    Length: 580 aa     Download sequence    Send to blast
MASCDDDFAL LGDEGQSHHH HPQQQQQASA TVAAGPVSFS SHRYISKAPM PIHSRSIHLN  60
PINSKKVAIG AVSQEDDHEG YGQAFAQTDM NPHNHCFTGD DPGSNPFDPA QHPEDDDVDG  120
DDNPSNKSHA AASASHLHHQ QQQQHPHHAS RVDSKRRDRD ELSDGESPYG YNIGNKRSRS  180
ALTAPNSSGD YRKDREEWSD SAIGCLLDAY TEKYIQLNRG NLRGRDWEDV ATTVSERCDK  240
QKSGKTVEQC KNKVDNLKKR YKVECQRLSS GNLTVSHWPW FKKMEQVVGS SSSSKVVPDE  300
DKGAALGDTT PAPRQMKRYP VTSPVSSSLT SNFKLKSLSN PRWKRAVLKI SSAVLAGTGP  360
QNVDPKVMML IAKEVAMASR VGVEVAIVVG GRNFFCGDTW VEVTGIDRST TYQISMMASV  420
MNAILLQASF EKIGVETRVQ TAFMMQEVAE PYIRRRAIRH LEKGRIVIFG GIGVGTGNPL  480
FTTDTAAALR ASEINADVVL KGTTTDIVYD CHSRSSSSSF EHISFREWIS RGFNAIDMAA  540
VTFCEENNIP VVLFNLMETN SISRALCGDQ VGTLIDQSGR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ek5_A7e-583375753239Uridylate kinase
3ek5_B7e-583375753239Uridylate kinase
3ek5_C7e-583375753239Uridylate kinase
3ek5_D7e-583375753239Uridylate kinase
3ek5_E7e-583375753239Uridylate kinase
3ek5_F7e-583375753239Uridylate kinase
3ek6_A7e-583375753239Uridylate kinase
3ek6_B7e-583375753239Uridylate kinase
3ek6_C7e-583375753239Uridylate kinase
3ek6_D7e-583375753239Uridylate kinase
3ek6_E7e-583375753239Uridylate kinase
3ek6_F7e-583375753239Uridylate kinase
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00340DAPTransfer from AT3G10030Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020571436.10.0uncharacterized protein LOC110018458 isoform X1
TrEMBLA0A2I0X9K90.0A0A2I0X9K9_9ASPA; Uridylate kinase
STRINGXP_008813118.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19353442
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10030.11e-166Trihelix family protein