PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_09399

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

bHLH

Protein Properties

Length: 445aa MW: 48704.6 Da PI: 6.5199

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_09399	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	27.6	5.4e-09	288	336	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PEQU_09399 288 NSHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 336 58***********************9....677***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	3.06E-11	283	340	No hit	No description
SuperFamily	SSF47459	4.58E-17	283	353	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.478	285	335	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	7.5E-17	286	350	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	4.4E-6	288	336	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	5.5E-10	291	341	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence Send to blast
MDLGEKKFGL EKRSTDSLNC STAGLPTTEW NQIGSLPCPS ASMAESFGHV IWNQLPANTQ 60 SLNFSNAQTT ASSSAIGKPV PMNWNPSDSL TKGGMFLNTG PGMLPLSLSQ FPCDAGFTER 120 AARFSCFGDA TYPFIVPGTS DAIAEAQMQK NEAGRMIEAL KGRSVLIDQN SNSGSSLKEQ 180 REKKGANELS EPEFSEDARE DSPNSCKGVF GLNKRKRSNQ DMESDQGQAA AQFPFEAAKD 240 ATDNMQKAEK TISTMAAVKF SGKNTKESGE PPKEDYIHVR ARRGQATNSH SLAERVRREK 300 ISERMKFLQD LVPGCNKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLAAVN PSLDFNVEGL 360 LSKDLFQNRT GSSSSIGFTP EMIHQQLHPA HQALIQVGMP GIMNPSDSFR RALNAQLNST 420 SGYKEATQQV FTENFLCFNN YSVDC

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence Send to blast

MDLGEKKFGL EKRSTDSLNC STAGLPTTEW NQIGSLPCPS ASMAESFGHV IWNQLPANTQ  60
SLNFSNAQTT ASSSAIGKPV PMNWNPSDSL TKGGMFLNTG PGMLPLSLSQ FPCDAGFTER  120
AARFSCFGDA TYPFIVPGTS DAIAEAQMQK NEAGRMIEAL KGRSVLIDQN SNSGSSLKEQ  180
REKKGANELS EPEFSEDARE DSPNSCKGVF GLNKRKRSNQ DMESDQGQAA AQFPFEAAKD  240
ATDNMQKAEK TISTMAAVKF SGKNTKESGE PPKEDYIHVR ARRGQATNSH SLAERVRREK  300
ISERMKFLQD LVPGCNKVTG KAVMLDEIIN YVQSLQRQVE FLSMKLAAVN PSLDFNVEGL  360
LSKDLFQNRT GSSSSIGFTP EMIHQQLHPA HQALIQVGMP GIMNPSDSFR RALNAQLNST  420
SGYKEATQQV FTENFLCFNN YSVDC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020571183.1	0.0	transcription factor bHLH49-like
Refseq	XP_020571184.1	0.0	transcription factor bHLH49-like
TrEMBL	A0A2I0VLD8	0.0	A0A2I0VLD8_9ASPA; Transcription factor bHLH49
STRING	XP_008788970.1	1e-144	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2909	37	85

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68920.3	8e-89	bHLH family protein