PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09358
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 294aa    MW: 32823.8 Da    PI: 6.8755
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09358genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.8e-113077247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+WT++E +l+ +a +++ ++   +W  +ar+++ g+t  +++s++q++
       PEQU_09358 30 GNWTQQENKLFEKALARFDTDtpeRWLMVARMIP-GKTVDDVVSHYQDL 77
                     89********************************.************86 PP
2Myb_DNA-binding36.21.4e-11137180347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
       PEQU_09358 137 PWTEEEH-KFLLGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 180
                      5887777.57779*******************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512937.452782IPR017884SANT domain
SMARTSM007171.3E-82880IPR001005SANT/Myb domain
PfamPF002492.0E-83077IPR001005SANT/Myb domain
SuperFamilySSF466894.16E-113085IPR009057Homeodomain-like
CDDcd001671.96E-63177No hitNo description
PROSITE profilePS5129416.093130185IPR017930Myb domain
SuperFamilySSF466891.08E-14132185IPR009057Homeodomain-like
TIGRFAMsTIGR015572.2E-15133183IPR006447Myb domain, plants
SMARTSM007171.1E-7134183IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-9136179IPR009057Homeodomain-like
PfamPF002492.1E-9137180IPR001005SANT/Myb domain
CDDcd001677.07E-10137181No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MMTNSGMEVL TPAPAYFSNY NWFVGEKKCG NWTQQENKLF EKALARFDTD TPERWLMVAR  60
MIPGKTVDDV VSHYQDLEED VSCIEAGLIP FPGYSSSSLT LDWESDHGFD GLKQDYCFGG  120
KRSGGRLADH ERKKGIPWTE EEHKFLLGLK KYGKGDWRNI SRNFVVTRTP TQVASHAQKY  180
FLRLNSGGKD KRRASIHDIT TINMEDSSPS SPSQPSVVTV QSCSAIAPSS EHFSVAVDSK  240
QLNEVANFFS KSVDSNPYIP SPYGLQQYGM IQQARNLQPS NLSGSIVGNN GVLF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A2e-1732971176RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020694734.10.0transcription factor DIVARICATA-like
RefseqXP_020694735.10.0transcription factor DIVARICATA-like
SwissprotQ8S9H72e-94DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A455LAB40.0A0A455LAB4_9ASPA; Transcription factor DIVARICATA-like protein
STRINGXP_008785419.11e-135(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22743796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.11e-81MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]