PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_09284
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GRAS
Protein Properties Length: 628aa    MW: 72122.4 Da    PI: 6.2241
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_09284genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS354.91.2e-1082576262374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lLl cA+  ++ d ++a +lL+++++++sp+gd+ qRla+yf+ +L+arl++++sel ++++ ++++    +++l+a+kl+   +P+ k+s+  aNq
  PEQU_09284 257 QTLLLLCAQTAANYDSRRAYELLKQIRQHSSPHGDASQRLAHYFADGLEARLSGTGSELHHSVAFNQKT---LKDALSAYKLYLASCPFKKISYHFANQ 352
                 5799********************************************************999999998...*************************** PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +Il+ +++++rvHi+Df+i  G+QWp +l+ L+ R++gpp+lRiTg++ p++g   ++++eetg+rL+++Ae++gvpfe++  +a +++++++eeL+++
  PEQU_09284 353 TILDTIQNADRVHILDFGIYFGFQWPVFLKLLSLRSGGPPKLRITGIDIPQPGfrPTKMIEETGRRLTDYAERFGVPFEYHG-IAAKFDEINVEELSID 450
                 ****************************************************9*9***************************.799************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivn 296
                 ++E+l+ n+ ++lh+  de+v  e +rd+vL+++++l+P v+v v  +  ++++ F++r+ eal+++sa+fd+++a+  rese+r +vEr l gr + n
  PEQU_09284 451 EEEMLVANCLFRLHSPADETVFEECPRDKVLNTIRKLNPAVFVNVVLNGTYGAPLFMTRVREALYHFSAVFDMIDATTIRESETRLMVERDLYGRLLIN 549
                 **************************************************************************9999********************* PP

        GRAS 297 vvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +++ceg e rer et+++W+ r  +aGF+ +p s + +k++k  +r ++ + + ++e++ +l+ gWk+r L+++SaW+
  PEQU_09284 550 AISCEGLE-RERPETYRQWQVRCLRAGFGMAPNSRRFVKKVKDGVRSIYHEDFCIDEDDRWLLVGWKGRILYALSAWK 626
                 ********.9***************************************999*************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098562.164230606IPR005202Transcription factor GRAS
PfamPF035144.1E-106257626IPR005202Transcription factor GRAS
Sequence ? help Back to Top
Protein Sequence    Length: 628 aa     Download sequence    Send to blast
MKGNPRKSSQ IFSDEVLDYI KQLFMEEDVD VLQSHPELEA TEKPFYELIG EKYPPSPDRS  60
PPESSGENRS CNTISDGIDF FQSNSEFAWY RNCDISPSHP SLGLQEDQFT NLFFRYLPTS  120
EFHKGVEEAK KFLPNENNLA IHHFAQADLT LQREPIEGAR RKQNRSSDEW TNEEARRSKQ  180
SASFSEEPTV PSEILDELLL CSGDKFPKIV KAIRKDFYKE ASLNSQNTEP KELGTRRKSS  240
KTKQPKKTED AEEADIQTLL LLCAQTAANY DSRRAYELLK QIRQHSSPHG DASQRLAHYF  300
ADGLEARLSG TGSELHHSVA FNQKTLKDAL SAYKLYLASC PFKKISYHFA NQTILDTIQN  360
ADRVHILDFG IYFGFQWPVF LKLLSLRSGG PPKLRITGID IPQPGFRPTK MIEETGRRLT  420
DYAERFGVPF EYHGIAAKFD EINVEELSID EEEMLVANCL FRLHSPADET VFEECPRDKV  480
LNTIRKLNPA VFVNVVLNGT YGAPLFMTRV REALYHFSAV FDMIDATTIR ESETRLMVER  540
DLYGRLLINA ISCEGLERER PETYRQWQVR CLRAGFGMAP NSRRFVKKVK DGVRSIYHED  600
FCIDEDDRWL LVGWKGRILY ALSAWKPS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A8e-4626362726380Protein SCARECROW
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020571227.10.0scarecrow-like protein 9
TrEMBLA0A3G2CI740.0A0A3G2CI74_CYMEN; Scarecrow-like protein 14-like
STRINGXP_008784606.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP150538118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-156GRAS family protein