PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_08788
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 317aa    MW: 35917.8 Da    PI: 9.5632
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_08788genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.41.8e-1323107186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  + aL+ea  ++  +l+rg+l++++W++v++ +     + g  ++++ qCk++++ l+k+yk +k   ++      st+p+f++++
  PEQU_08788  23 CWSEGATEALVEAWGDRFLHLNRGNLRQKDWKDVADSVnarqDAVGNpRKTSGQCKNRIDTLKKKYKLEKSKPGR------STWPFFSRID 107
                 7*************************************998855555266******************9999997......58****9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.6E-2421107No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MNFRRRAAAA ATVTSGAGMR EDCWSEGATE ALVEAWGDRF LHLNRGNLRQ KDWKDVADSV  60
NARQDAVGNP RKTSGQCKNR IDTLKKKYKL EKSKPGRSTW PFFSRIDLLV GHSPEKASLG  120
IKVKQRNPNS SSATPPHNLL LSSWGSSRVR TNLPDAAQSS REGGGVGYGD FDGREDMDRT  180
EEVGKIPLFG YLDIQESRKP GCGLGVFSSG DDGGGGEDRG DFREFVRAVE KIGDIYERVE  240
RSKLQQAIEL ERQRMEFEKE IEIQRMKVFM ETQLELQRMK WRKCNSDSGK FVMIYEIVFL  300
VSIILLLHIR IKILDHF
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020585855.10.0trihelix transcription factor ASIL1-like
SwissprotQ9LJG88e-30ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLA0A2I0WBH61e-132A0A2I0WBH6_9ASPA; Uncharacterized protein
STRINGXP_008789150.12e-63(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20653279
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G11100.14e-29sequence-specific DNA binding transcription factors