PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07802
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 341aa    MW: 38667.6 Da    PI: 6.5266
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07802genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix71.41.6e-222106186
    trihelix   1 rWtkqevlaLiearr.................emeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.t 72 
                 +Wt+++v++L+ ++                           k         lkk++W++vs+ m+e+gf +sp+qC++k+++lnkryk+++e  +k+  
  PEQU_07802   2 KWTDSMVRLLVSVVHsagddiagvecsdqyqkG--------KkspsstsmqLKKGKWKSVSRSMMEKGFYVSPQQCEDKFNDLNKRYKRVNELLGKGmG 92 
                 7**************777777777444444330........2445555555**********************************************66 PP

    trihelix  73 sessstcpyfdqle 86 
                 ++++++ +++d+++
  PEQU_07802  93 CKVVENPALLDSMD 106
                 ************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.4E-182132No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010629Biological Processnegative regulation of gene expression
GO:1900037Biological Processregulation of cellular response to hypoxia
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MKWTDSMVRL LVSVVHSAGD DIAGVECSDQ YQKGKKSPSS TSMQLKKGKW KSVSRSMMEK  60
GFYVSPQQCE DKFNDLNKRY KRVNELLGKG MGCKVVENPA LLDSMDHLSQ KAREEARKLL  120
SSKHLFFREM CAYHNNCPSA SAALRPDHSP SLSPATIKIQ KKGGGGGGLC TVEEESRHLC  180
QEDEEEEEEE DDYNEEESED EDDGSLGVKR KAALSPAAMS PLSLSLCSPS GSSSAQGEQQ  240
QREWVRMKLA ELEEKRVIYQ KQALQLEKQR FKWLRFSSNK EREMEKMRLW NERLRLENER  300
MLLLLQQKEI RLFESAGKAG GEANGGEIAS YQFPAVDRNQ N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581387.10.0uncharacterized protein LOC110025313
TrEMBLA0A2I0WV851e-150A0A2I0WV85_9ASPA; Uncharacterized protein
STRINGEOY080799e-84(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119443138
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10040.12e-52sequence-specific DNA binding transcription factors