PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_07681
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family DBB
Protein Properties Length: 339aa    MW: 37633.5 Da    PI: 5.5852
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_07681genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box17.86.8e-06446541
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41
                 C+ +e  e++  C  ++  lC +C ++ H        H++v 
  PEQU_07681  4 QCNACEVAEAKVLCCADEAALCWECDEKVHAAnklagkHQRVL 46
                7******99*********************6678888888775 PP
2zf-B_box18.73.6e-061151441437
    zf-B_box  14 lqlfCedCqqllCedClleeHkg......H 37 
                 + +fC +++  lC++C ++ H        H
  PEQU_07681 115 AYFFCLEDRAILCRNCDFSVHTAnpcvsiH 144
                 78******************9555555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.698147IPR000315B-box-type zinc finger
CDDcd000211.36E-6347No hitNo description
SMARTSM003367.6E-10447IPR000315B-box-type zinc finger
SMARTSM003363.6E-6102149IPR000315B-box-type zinc finger
CDDcd000212.15E-5115143No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009641Biological Processshade avoidance
GO:0009658Biological Processchloroplast organization
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010099Biological Processregulation of photomorphogenesis
GO:0015995Biological Processchlorophyll biosynthetic process
GO:0016607Cellular Componentnuclear speck
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MKIQCNACEV AEAKVLCCAD EAALCWECDE KVHAANKLAG KHQRVLLLSA SSSNPSYRVP  60
KCDICQHLYF CEKMSEFELQ PFLSKLYTWL LTIFKRHIYI HTTQLLCIFL LEGSAYFFCL  120
EDRAILCRNC DFSVHTANPC VSIHQRFLLT GVQVGLESTA SAPSISKDQS SSAKVPLEPS  180
SNHPKSSLLA TSHSEELNEV YSTEITKDGR IGPLATFFGG APMAASITEW PLDEFFRFTD  240
FNQNYEFTDN GSSKADSGKL GSSDGSPMNH SFDEEMEAEE CLGLVPEIPS PPTSSGLNWP  300
RSSRYLSSDN AAFVPDISSL QNPYQARMTL SKRRRSCNG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020581542.10.0B-box zinc finger protein 22 isoform X2
TrEMBLA0A385IU611e-166A0A385IU61_9ASPA; B-box zinc finger protein-like protein
STRINGXP_008794150.11e-109(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP17943382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78600.16e-72light-regulated zinc finger protein 1