PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_06722

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

GeBP

Protein Properties

Length: 357aa MW: 39719.3 Da PI: 9.0987

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_06722	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	34.2	7.2e-11	98	184	7	98
DUF573 7 wseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWgs 98 w e + lL+ li +ak g ++++ +++ + + +k+ ++ s+++l++K+r+L+ Kf+k k g e s++ d++ +el+ k+Wg+ PEQU_06722 98 WGEAETLKLLKSLIALRAKSGYKVTStNVSVLLKEIKNWAPSQLSEKNLSSKLRHLRFKFHKSPKP---GPE---SSDFDRSFYELALKVWGQ 184 9999****************88777******************************99999...444...678899********96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	1.7E-8	98	183	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence Send to blast
MGSKRSSSKH TSKERSSPPP ADPSVDGDHQ NPSHGTPSKS RKKPKLSAPT SNDSSFLSPT 60 PSTEGEAHSQ DNHRKGKAAE VSNEKQDGAA SRSSLLRWGE AETLKLLKSL IALRAKSGYK 120 VTSTNVSVLL KEIKNWAPSQ LSEKNLSSKL RHLRFKFHKS PKPGPESSDF DRSFYELALK 180 VWGQESLKDK GNDAGAAKEH GGVEKKANAT GKRTKVSKKT KGEKKNVVDE KEDDDAVEEE 240 ERDSERDDGA PEKAEKNMVM EDGEEHEKDE LLVDGDNGLF EAKGAEHSYK YLRLALEEYW 300 TESKLNMDTL YAALPKVNPV QAKRLDENFR EIFVKMLKLK MEKNQVSNEI IRASLGC

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence Send to blast

MGSKRSSSKH TSKERSSPPP ADPSVDGDHQ NPSHGTPSKS RKKPKLSAPT SNDSSFLSPT  60
PSTEGEAHSQ DNHRKGKAAE VSNEKQDGAA SRSSLLRWGE AETLKLLKSL IALRAKSGYK  120
VTSTNVSVLL KEIKNWAPSQ LSEKNLSSKL RHLRFKFHKS PKPGPESSDF DRSFYELALK  180
VWGQESLKDK GNDAGAAKEH GGVEKKANAT GKRTKVSKKT KGEKKNVVDE KEDDDAVEEE  240
ERDSERDDGA PEKAEKNMVM EDGEEHEKDE LLVDGDNGLF EAKGAEHSYK YLRLALEEYW  300
TESKLNMDTL YAALPKVNPV QAKRLDENFR EIFVKMLKLK MEKNQVSNEI IRASLGC

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A2I0X2E4	1e-140	A0A2I0X2E4_9ASPA; Uncharacterized protein