PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_05180

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Dof

Protein Properties

Length: 267aa MW: 29125 Da PI: 8.0654

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_05180	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.5	7.2e-39	49	107	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 lkcprCds+ntkfCyynny+lsqPr+fCk+CrryWtkGG lrnvPvGgg+rk k+ss PEQU_05180 49 PPLKCPRCDSQNTKFCYYNNYNLSQPRHFCKSCRRYWTKGGVLRNVPVGGGCRKPKRSS 107 5789***************************************************9986 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	9.0E-25	44	100	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.516	51	105	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	8.1E-33	51	105	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	53	89	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 267 aa Download sequence Send to blast
MQDFQSIMGQ TTDRIFGGVT DGTAGGWDNR RLITCPSATT AASSHHPPPP LKCPRCDSQN 60 TKFCYYNNYN LSQPRHFCKS CRRYWTKGGV LRNVPVGGGC RKPKRSSNSK SHRSSASRSS 120 SDSSGRNPPA PPDSENFPKS SSSNPNPPNP SSFDQPFTVS QNGAVDIFPD GAGTFSNLTA 180 ATANQSIHGF NFIDSQLLRV PDPRQRVEEI PTQDIIHQVA TSRGDNSAIE WPPAMDTGIY 240 DLAGATDPVT YWSQSHWIDG ESSLYLP

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00570	DAP	Transfer from AT5G60850	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020590623.1	0.0	dof zinc finger protein DOF5.4-like
TrEMBL	A0A2I0XI14	1e-103	A0A2I0XI14_9ASPA; Dof zinc finger protein DOF5.4

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP6496	30	50

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	3e-31	Dof family protein