PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_05123 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | GeBP | ||||||||
Protein Properties | Length: 270aa MW: 30413.5 Da PI: 9.917 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 101.9 | 5.5e-32 | 24 | 122 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 +fq+lw+ De+ +LqG+++f++k+g+ ++++d+ f++ ++ +++f+++k+q+ eK+rrLKkK+++ +k+ sg+ ++f+++hd+ ++e+s+kiW PEQU_05123 24 MFQKLWTHADEMKVLQGFLEFTSKRGTthaNYQHDTGPFFNEIRPRLQFDFNKNQIAEKLRRLKKKYRNAAAKIGSGRGFVFKSPHDRATYEISRKIWS 122 79************************98867777****************************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.1E-30 | 25 | 122 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
MIGISDHIHR QIANTSGGEE SRRMFQKLWT HADEMKVLQG FLEFTSKRGT THANYQHDTG 60 PFFNEIRPRL QFDFNKNQIA EKLRRLKKKY RNAAAKIGSG RGFVFKSPHD RATYEISRKI 120 WSTKIWSTTT FYRKPKNRSN QEDRSGGVGG SEVTNFPAAL DCFASASPPS LAEEIGPVPP 180 PSKTEDVAAA AAGQSVEEEA VRICLAPVFK ELVQFAVAGA TTAPPIALAV EGDERWRQQR 240 IMELELYLKR MELVEEWVRS SLEKLRSLGS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020590480.1 | 0.0 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A2I0WQY5 | 1e-151 | A0A2I0WQY5_9ASPA; Mediator-associated protein 1 | ||||
STRING | XP_008807916.1 | 1e-75 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 5e-50 | DNA-binding storekeeper protein-related transcriptional regulator |