PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04715
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 144aa    MW: 16322.4 Da    PI: 5.3285
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04715genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.51.9e-19655255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                +y+GVr+++ +g+Wv+eIr+p        +r++lg+f tae+Aa+a+++a+k + g
  PEQU_04715  6 RYRGVRQRH-WGSWVSEIRHP-----LlkTRIWLGTFETAEDAARAYDEAAKFMCG 55
                69******9.**********8.....334***********************9976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000189.39E-32563No hitNo description
SMARTSM003807.7E-39669IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.6E-34664IPR001471AP2/ERF domain
SuperFamilySSF541714.25E-21664IPR016177DNA-binding domain
PfamPF008474.6E-13655IPR001471AP2/ERF domain
PROSITE profilePS5103220.877663IPR001471AP2/ERF domain
PRINTSPR003672.1E-11718IPR001471AP2/ERF domain
PRINTSPR003672.1E-112945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MPKLQRYRGV RQRHWGSWVS EIRHPLLKTR IWLGTFETAE DAARAYDEAA KFMCGARART  60
NFPLNSSSVS ALSPSLVAKL ERCCIASQEE MRRAKVEMES EEMKCMDEES IEEMIEELTY  120
YGSVEISSSY SSSSTATSCS NSIN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-19368268ATERF1
3gcc_A1e-19368268ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00526DAPTransfer from AT5G25190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020578605.11e-102ethylene-responsive transcription factor ERF003-like
SwissprotQ94AW59e-47ERF03_ARATH; Ethylene-responsive transcription factor ERF003
TrEMBLA0A3G5BCR41e-101A0A3G5BCR4_PHAEQ; AP2/ERF transcription factor
STRINGXP_008779295.12e-64(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP141835118
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25190.16e-29ERF family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]