PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_04699
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ARR-B
Protein Properties Length: 173aa    MW: 19647.8 Da    PI: 8.3474
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_04699genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like72.18.4e-23121170151
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                 kpr+ W+peLH +F++ v+qL G+ +A Pk+il+++++ gLt+e+v+SHLQ
  PEQU_04699 121 KPRVTWSPELHVKFINIVNQL-GISRAAPKKILDMLNISGLTRENVASHLQ 170
                 79*******************.***************************** PP
2Response_reg31.31e-1115553108
                   CTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHH CS
  Response_reg  53 mpgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelv 108
                   mp+mdG++ll+ i   e++lp+i+++   + + + + +  Ga d+l+Kp+  eel 
    PEQU_04699   1 MPDMDGFKLLE-IVGLEMDLPVIMLSVDCDVKNVMKGIMHGAVDYLAKPVRLEELK 55 
                   9*********7.5556679*********************************9996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521724.98E-15170IPR011006CheY-like superfamily
CDDcd001561.89E-12161No hitNo description
PfamPF000727.8E-9155IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:3.40.50.23003.3E-19187No hitNo description
PROSITE profilePS5011022.536162IPR001789Signal transduction response regulator, receiver domain
PROSITE profilePS512949.541118173IPR017930Myb domain
SuperFamilySSF466892.33E-13119170IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.8E-21119170IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-18121171IPR006447Myb domain, plants
PfamPF002494.5E-6123170IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    Send to blast
MPDMDGFKLL EIVGLEMDLP VIMLSVDCDV KNVMKGIMHG AVDYLAKPVR LEELKLIWKH  60
VVRRSLNEKK DQNVTNKQLG HATKSEEDQK LRHTKKCKGH NKESDNEVCA DSDEDMNPQK  120
KPRVTWSPEL HVKFINIVNQ LGISRAAPKK ILDMLNISGL TRENVASHLQ VCS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1irz_A1e-18117170154ARR10-B
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins. {ECO:0000250|UniProtKB:Q940D0}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020578712.11e-121two-component response regulator ORR23-like isoform X1
RefseqXP_020578714.11e-121two-component response regulator ARR18-like isoform X3
RefseqXP_020578715.11e-121two-component response regulator ARR18-like isoform X4
RefseqXP_020578716.11e-121two-component response regulator ARR18-like isoform X4
RefseqXP_020578717.11e-122two-component response regulator ARR18-like isoform X5
SwissprotB8AEH13e-55ORR23_ORYSI; Two-component response regulator ORR23
SwissprotQ6K8X63e-55ORR23_ORYSJ; Two-component response regulator ORR23
TrEMBLA0A2I0W9B13e-96A0A2I0W9B1_9ASPA; Two-component response regulator ARR10
STRINGEOY296021e-57(Theobroma cacao)
STRINGevm.model.supercontig_127.104e-59(Carica papaya)
STRINGGSMUA_Achr10P23650_0012e-58(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP112222741
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.17e-53response regulator 2
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]