PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_03826
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 286aa    MW: 31289.8 Da    PI: 6.3185
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_03826genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.83.9e-111156346
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     +W+ eE++ + +av+ +  +   +W++Ia+ ++  +t +q+ +++q 
       PEQU_03826 11 SWSWEEEKAFENAVAVYTEDsddRWEKIAANVP-MKTIEQIMHHYQL 56
                     5********************************.***********96 PP
2Myb_DNA-binding43.29.4e-14116160347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +W++eE+ l++ + +++G+g+W++I+r +  +Rt+ q+ s+ qk+
       PEQU_03826 116 AWSEEEHRLFLLGLEKYGKGDWRSISRNFVVTRTPTQVASHAQKF 160
                      6******************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS512936.292762IPR017884SANT domain
SMARTSM007172.3E-7860IPR001005SANT/Myb domain
SuperFamilySSF466891.51E-91165IPR009057Homeodomain-like
PfamPF002493.3E-101156IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.608.8E-61155IPR009057Homeodomain-like
CDDcd001671.25E-41857No hitNo description
PROSITE profilePS5129416.675109165IPR017930Myb domain
SuperFamilySSF466894.09E-16111165IPR009057Homeodomain-like
SMARTSM007177.0E-11113163IPR001005SANT/Myb domain
TIGRFAMsTIGR015571.6E-16113163IPR006447Myb domain, plants
PfamPF002493.1E-11116159IPR001005SANT/Myb domain
CDDcd001671.37E-10116161No hitNo description
Gene3DG3DSA:1.10.10.604.6E-11116156IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MAMEESSSSY SWSWEEEKAF ENAVAVYTED SDDRWEKIAA NVPMKTIEQI MHHYQLLEED  60
VGAIESGLIP LPNYPSSKTT DESAINDGSS KKSGQGNSHE SSKGSRLEQE RRKGIAWSEE  120
EHRLFLLGLE KYGKGDWRSI SRNFVVTRTP TQVASHAQKF FIRLNSGNKD RRRSSIHDIT  180
TVGDGDAPAV PQTNATLSKT VNSVNQLSDQ SAEPHGVGPC GTAIGHPVVS GLVTAIGTPV  240
IIPVPGAVMQ MGYGVRTPVT AETVVPEDPV NFPIQSRSTP RKSSRR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A8e-1612771176RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that coordinates abscisic acid (ABA) biosynthesis and signaling-related genes via binding to the specific promoter motif 5'-(A/T)AACCAT-3'. Represses ABA-mediated salt (e.g. NaCl and KCl) stress tolerance. Regulates leaf shape and promotes vegetative growth. {ECO:0000269|PubMed:26243618}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by salicylic acid (SA) and gibberellic acid (GA) (PubMed:16463103). Triggered by dehydration and salt stress (PubMed:26243618). {ECO:0000269|PubMed:16463103, ECO:0000269|PubMed:26243618}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020600158.10.0transcription factor SRM1-like
SwissprotQ9FNN62e-84SRM1_ARATH; Transcription factor SRM1
TrEMBLA0A482DHM11e-154A0A482DHM1_9ASPA; RR-type MYB transcription factor 6 (Fragment)
STRINGXP_008802864.11e-101(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63763854
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.14e-82MYB family protein
Publications ? help Back to Top
  1. Wang T, et al.
    Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis.
    Plant Physiol., 2015. 169(2): p. 1027-41
    [PMID:26243618]
  2. Chen YS, et al.
    Two MYB-related transcription factors play opposite roles in sugar signaling in Arabidopsis.
    Plant Mol. Biol., 2017. 93(3): p. 299-311
    [PMID:27866313]