PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_03421

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Trihelix

Protein Properties

Length: 392aa MW: 44005.9 Da PI: 7.1513

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_03421	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	99.2	3.4e-31	256	341	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW+k evlaLi++r+ +e r+ ++ k+p We++s m++ g++rspk+Ckekwen+nk++kk+keg+kkr +e+ +tcpyf++l+a PEQU_03421 256 RWPKTEVLALIKLRSGLEVRYLETGPKGPFWEDISMGMKRPGYNRSPKRCKEKWENINKYFKKVKEGNKKR-PEDANTCPYFHELDA 341 8*******************************************************************8.99999******85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	7.329	249	313	IPR017877	Myb-like domain
SMART	SM00717	0.0014	253	315	IPR001005	SANT/Myb domain
Pfam	PF13837	2.6E-21	255	342	No hit	No description
CDD	cd12203	7.05E-26	256	320	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence Send to blast
MALTAVDTAQ PPPTTAHAGI SFSSDTSSSS SSDSDAENND YGGAGELPDG GRKRKREGWP 60 YGNGKTIAFF DDGGADKLPY GGRKRKREGW SYGNGKMIAF FEKLMNQLIE RQEAMQQRFL 120 DTIEKREQDR MAREEAWKRQ EMARLNHEYE LMVQERTMTA NHDAAVISFL QRFAGAGLTV 180 TNQQNALIEA TTFSAPAPPE VSQEDQPEGQ RSHQVNEIVI HQASASLDPA ASNAEMVSEV 240 MEVSMSSPKS NSSSSRWPKT EVLALIKLRS GLEVRYLETG PKGPFWEDIS MGMKRPGYNR 300 SPKRCKEKWE NINKYFKKVK EGNKKRPEDA NTCPYFHELD ALYRRKQQQE TATNTEQPIS 360 VSVEQESNNG GNKNLITVRN NVESTGFQMT RS

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence Send to blast

MALTAVDTAQ PPPTTAHAGI SFSSDTSSSS SSDSDAENND YGGAGELPDG GRKRKREGWP  60
YGNGKTIAFF DDGGADKLPY GGRKRKREGW SYGNGKMIAF FEKLMNQLIE RQEAMQQRFL  120
DTIEKREQDR MAREEAWKRQ EMARLNHEYE LMVQERTMTA NHDAAVISFL QRFAGAGLTV  180
TNQQNALIEA TTFSAPAPPE VSQEDQPEGQ RSHQVNEIVI HQASASLDPA ASNAEMVSEV  240
MEVSMSSPKS NSSSSRWPKT EVLALIKLRS GLEVRYLETG PKGPFWEDIS MGMKRPGYNR  300
SPKRCKEKWE NINKYFKKVK EGNKKRPEDA NTCPYFHELD ALYRRKQQQE TATNTEQPIS  360
VSVEQESNNG GNKNLITVRN NVESTGFQMT RS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020572867.1	0.0	LOW QUALITY PROTEIN: trihelix transcription factor GT-2-like
TrEMBL	A0A2I0WPP8	1e-139	A0A2I0WPP8_9ASPA; Trihelix transcription factor GT-2
STRING	XP_004309494.1	2e-87	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP606	38	175

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76890.2	4e-66	Trihelix family protein