PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02869
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family TALE
Protein Properties Length: 431aa    MW: 49111.4 Da    PI: 7.8346
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02869genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox27.94.1e-092222591954
                 HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
    Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                 Fe   ++yps  ++  LA+++gL+ +qV++WF N R +
  PEQU_02869 222 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 259
                 664459******************************88 PP
2BELL112.13e-3685153472
        BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                 elqk+kakLl+lleeVd+rYk+y+eq+++v+ssFeavag gsa+ Y +lA+ka+SrhFr+L+d i++qi
  PEQU_02869  85 ELQKRKAKLLTLLEEVDRRYKRYCEQMRAVVSSFEAVAGEGSATTYLALASKAMSRHFRSLRDGIVNQI 153
                 89******************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005749.3E-4623151IPR006563POX domain
PfamPF075262.7E-4129149IPR006563POX domain
PROSITE profilePS5007112.115200263IPR001356Homeobox domain
SMARTSM003894.5E-9203267IPR001356Homeobox domain
CDDcd000865.39E-11203264No hitNo description
SuperFamilySSF466891.33E-17204270IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.0E-28206269IPR009057Homeodomain-like
PfamPF059205.2E-18220259IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0048481Biological Processplant ovule development
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0009506Cellular Componentplasmodesma
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MEMLEFPSKH HHHQHQHHQN HHNPEAHKLR LSKYLIPTQE LLSEFCDLGG VKATKQKQHN  60
TRFEEGGPSS DSPVMHSLQN LDILELQKRK AKLLTLLEEV DRRYKRYCEQ MRAVVSSFEA  120
VAGEGSATTY LALASKAMSR HFRSLRDGIV NQIQAAKKTM GEKDPIAAGI SRGDTPRLKV  180
LDQCFRQQKA FQQGGTLMEQ HPWRPQRGLP ERSVSILRAW LFEHFLHPYP SDVDKHILAR  240
QTGLSRSQVS NWFINARVRL WKPMIEEMYT EEIKEHEMQS NGPPQEDDRK PKPSNSHGIA  300
ISTEQKPLAA ELLAEPDSLS SIINHHSESR SRHPNPRNQI TLQRTENFGI ADLDFSSYNG  360
CSTQSYSSNG VSLTLGLQHH EISPVNPQPL FYSRGQMEEC QPVQFSILDG DAQNLPYRNL  420
MGAQLLHDLA G
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A7e-16209267563Homeobox protein Meis2
3k2a_B7e-16209267563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020600024.10.0homeobox protein BEL1 homolog
SwissprotQ388971e-120BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A2I0X8170.0A0A2I0X817_9ASPA; Homeobox protein BEL1 like
STRINGXP_008783445.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38143764
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-122TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]