PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02755
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family GRAS
Protein Properties Length: 714aa    MW: 77680.9 Da    PI: 6.7725
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02755genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS291.52.3e-893417131374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlar.svselykalppsetsekn........sseelaalklfsevsP 89 
                 l+++L+++Ae+v++g++  a+ +Larl+++ + p g+p+ R a+yf+eAL+  +a+   + l ++ p  + ++ +        ++ +l+a+k+fsevsP
  PEQU_02755 341 LIDQLFKAAEFVETGNFISAHGILARLNHQlSFPLGKPLLRSAFYFKEALHLLVANsYNPPLTASYPHPHRAPFTtslftpldVVLKLSAYKAFSEVSP 439
                 5789************************997889*********************95556666665433333322367888889999************ PP

        GRAS  90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrl 186
                 il f+++t  q +le++ + +++H+iDfdi+ G+QW +++++La+R+  +++p+l+iT+++s  +++  el+ t e+L++fA+  ++pfe+n+   +++
  PEQU_02755 440 ILHFTNFTVTQVLLEELGTTDCIHVIDFDIGIGGQWSSFIHELAQRRssSSTPRLKITAFVSFCAFHPLELHLTSENLSHFAADRNIPFEINISSIESF 538
                 ********************************************99977889**********9999**************************9655666 PP

        GRAS 187 edleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                 + +e+ + +  ++E++aVnl +     +          +++L+l+k+l Pk+vv v+q +d+++ +F ++fl++++  + l+ds++a  +++ ++++k+
  PEQU_02755 539 DPVEILAASAGRNETIAVNLPVGAGLNP--------SFTATLHLIKQLTPKIVVSVDQGSDRSDLPFSHHFLHSFQSSMILLDSIDAA-GSNLDAANKI 628
                 666665556666*********9554444........46679********************************************999.7888****** PP

        GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 Er++l+++i+n+v+ + ++    + +   Wr+ +++aGF pv++s++++ qa++ll++v+++g++ve++++sl+l+W++ +Lvs+SaWr
  PEQU_02755 629 ERFILQPKIENCVMGRYRA----TDKILPWRSLFTSAGFVPVQFSNFTEVQADCLLKRVQVRGFHVEKRQASLYLYWQRGELVSISAWR 713
                 ***************9999....89999************************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098540.198315693IPR005202Transcription factor GRAS
PfamPF035147.9E-87341713IPR005202Transcription factor GRAS
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
GO:0048768Biological Processroot hair cell tip growth
GO:0051301Biological Processcell division
Sequence ? help Back to Top
Protein Sequence    Length: 714 aa     Download sequence    Send to blast
MRGMPFSRSG KGALEAIAAQ ILGEEDKGGT FWSRSSHRKK KGEVLEPRSV LYHRRSPSPP  60
TSTSTLSSSL SGGVGGGGGS TDTGGVAAVS ENPSQRKEEW ATELQTIAGS PEMSGFIGSG  120
EKCGMEAEDW ETMLSAPTAS PNQEQTFLRW IMGDINDPSA VSKHHHYPQI STQASPVEFD  180
AGIAGSSFGL VDPLFGFEPI GGIAGVTSSS GGFYQSSRNS DGKNAVFMSP PPGMAFFQEP  240
IEEKPQIFGH NLVLQTNTPS NPDLFVPSAS FGAVTEQHLT SNLLPSHPKR HHSMPNDPAC  300
QIPAVCTGKL LQAPYQLQQR LMKPRTSLAG EDAAAAAAFG LIDQLFKAAE FVETGNFISA  360
HGILARLNHQ LSFPLGKPLL RSAFYFKEAL HLLVANSYNP PLTASYPHPH RAPFTTSLFT  420
PLDVVLKLSA YKAFSEVSPI LHFTNFTVTQ VLLEELGTTD CIHVIDFDIG IGGQWSSFIH  480
ELAQRRSSSS TPRLKITAFV SFCAFHPLEL HLTSENLSHF AADRNIPFEI NISSIESFDP  540
VEILAASAGR NETIAVNLPV GAGLNPSFTA TLHLIKQLTP KIVVSVDQGS DRSDLPFSHH  600
FLHSFQSSMI LLDSIDAAGS NLDAANKIER FILQPKIENC VMGRYRATDK ILPWRSLFTS  660
AGFVPVQFSN FTEVQADCLL KRVQVRGFHV EKRQASLYLY WQRGELVSIS AWRC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5b3g_A6e-2534771225378Protein SCARECROW
5b3h_A6e-2534771224377Protein SCARECROW
5b3h_D6e-2534771224377Protein SCARECROW
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020590657.10.0scarecrow-like protein 27
TrEMBLA0A3G2CI320.0A0A3G2CI32_CYMEN; Scarecrow-like protein 27-like
STRINGGSMUA_Achr8P11160_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20203796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.12e-95GRAS family protein