PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_02580
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family AP2
Protein Properties Length: 581aa    MW: 64705.8 Da    PI: 6.6785
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_02580genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP227.29.4e-09279341355
         AP2   3 ykGV........rwdkkrgrWvAeIrd.pse.ng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                 y+GV        ++++++gr++A+++d  ++  g  rk  + g ++ +e+Aa+a++ a++k++g
  PEQU_02580 279 YRGVtryyilnlTRHRWTGRYEAHLWDnSCKkEGqTRKGRQ-GGYDMEEKAARAYDLAALKYWG 341
                 66665555555589*************77776664346655.77******************98 PP
2AP224.85.5e-08384418138
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt 38 
                 s y+GV+++++ grW A+I  +s    +k  +lg+f  
  PEQU_02580 384 SIYRGVTRHHQHGRWQARIGRVSG---NKDLYLGTFEN 418
                 57****************999754...4********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.08E-15277349No hitNo description
SMARTSM003802.7E-16278355IPR001471AP2/ERF domain
PROSITE profilePS5103216.647278349IPR001471AP2/ERF domain
SuperFamilySSF541715.1E-11290350IPR016177DNA-binding domain
PfamPF008472.1E-6291341IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-9292350IPR001471AP2/ERF domain
CDDcd000183.86E-22384455No hitNo description
SuperFamilySSF541712.03E-12384457IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.8E-5385418IPR001471AP2/ERF domain
SMARTSM003806.3E-27385462IPR001471AP2/ERF domain
PROSITE profilePS5103214.421385456IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.1E-6431456IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 581 aa     Download sequence    Send to blast
MNNNNWLGFS LSPQLGMEVA SDPLKHANPQ TAHQSSPASA STFVPSNFLL SYPHFSSPGI  60
CYGADAENVG FYSQLSSVMP VKSDGSLCIM EAFSRSQEGM VPSPSPKLED FLGCGPNMGT  120
HQYSNSDRGA MALSLDSMYY GQNIEQESNE NHSLELFQQP FRQQNYFQPL HEMYQESLVG  180
DQIPDCRFQS NERVGDAREM GFGSLGLLRH GDLKPLSLSM SPGSQSSCVT APQQQIASAP  240
ENEHFSLEHS KKRVSEKGAE KQPVHRKSID TFGQRTSQYR GVTRYYILNL TRHRWTGRYE  300
AHLWDNSCKK EGQTRKGRQG GYDMEEKAAR AYDLAALKYW GPATHINFPL EDYQEELLQM  360
KNMSRQEYVA HLRRKSSGFS RGASIYRGVT RHHQHGRWQA RIGRVSGNKD LYLGTFENSG  420
SLNLKILIPG TQEEAAEAYD IAAIKFRGTN AVTNFIMSRY DVEKIMASST LLSGELARRN  480
GGVEIFDNVA LTGHGTRELD STEDNVNASD WRMTLYQSPP PAPANLEPLD HQSISANGNH  540
QNSSFLANFN GFLGMESWAS NQLSSSVALA QTPVYAAWND G
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020588021.10.0AP2-like ethylene-responsive transcription factor ANT isoform X2
TrEMBLM9QXK40.0M9QXK4_9ASPA; AP2-3
STRINGXP_008784660.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP94838133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37750.11e-135AP2 family protein