PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PEQU_02210 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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Family | ERF | ||||||||
Protein Properties | Length: 194aa MW: 21576.9 Da PI: 4.3342 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 61.6 | 1.8e-19 | 12 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr+p + r kr +lg+f ta +Aa a+++a+ +++g PEQU_02210 12 CSYRGVRQRT-WGKWVAEIREP---N-RgKRLWLGTFPTALMAAHAYDQAATAMYG 62 67*****999.**********8...3.35**********************99987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00018 | 1.29E-29 | 12 | 70 | No hit | No description |
Pfam | PF00847 | 2.5E-14 | 12 | 62 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.5E-32 | 13 | 71 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 22.55 | 13 | 70 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.04E-22 | 13 | 71 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 8.7E-36 | 13 | 76 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-9 | 14 | 25 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.3E-9 | 36 | 52 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 194 aa Download sequence Send to blast |
MRGKGGPENS KCSYRGVRQR TWGKWVAEIR EPNRGKRLWL GTFPTALMAA HAYDQAATAM 60 YGPAARLNFP TNQTAASPSE SYGSTITTTN YSIGSADLMD CAKREENVEL AEWLNLAGDL 120 SSENFDVDEL LRMMDADPGN NGLSTEAAQN LDGEMLRGLE NQNYFIWPTR QELDYWPAGN 180 PEFFEPGFSD GVLF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 4e-17 | 3 | 70 | 5 | 72 | Ethylene-responsive transcription factor ERF096 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020588728.1 | 1e-143 | dehydration-responsive element-binding protein 2A-like | ||||
TrEMBL | A0A2I0WNM9 | 2e-75 | A0A2I0WNM9_9ASPA; Dehydration-responsive element-binding protein 2A | ||||
STRING | XP_008799804.1 | 2e-38 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7315 | 35 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G05410.2 | 3e-36 | DRE-binding protein 2A |