PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_02020

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

NAC

Protein Properties

Length: 328aa MW: 37799.7 Da PI: 6.0136

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_02020	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	151.7	3.5e-47	55	181	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgel 99 pGfrFhPt+eel+++yL++ + gkk+++ ++i++v++y ++PwdLp+++k +e+ewyfF++rd+++ +g r+nr+t++g+Wkatg+d+++ s+ ++l PEQU_02020 55 PGFRFHPTEEELLNFYLRRAAVGKKFNF-DIIATVNLYLYDPWDLPAMAKMGEREWYFFVPRDRRQGSGGRPNRTTERGFWKATGSDRHIRSStdPRRL 152 9***********************99.99***********9889999**********************************98766778 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128 +glkktLv+y grap+g+ktdW+m+eyrl PEQU_02020 153 IGLKKTLVYYGGRAPRGTKTDWIMNEYRL 181 *************************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	1.57E-55	53	207	IPR003441	NAC domain
PROSITE profile	PS51005	54.957	53	207	IPR003441	NAC domain
Pfam	PF02365	2.4E-24	55	181	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 328 aa Download sequence Send to blast
MDDASHGLLT GDLRLCWVDY LHDQPRTAPG IPIPNSIELF LRRKMERNSS EIELPGFRFH 60 PTEEELLNFY LRRAAVGKKF NFDIIATVNL YLYDPWDLPA MAKMGEREWY FFVPRDRRQG 120 SGGRPNRTTE RGFWKATGSD RHIRSSTDPR RLIGLKKTLV YYGGRAPRGT KTDWIMNEYR 180 LPDASNSFGS VSPMPKEDIV LCKVYRKATP LRELEQRAAM EEESRAYMAD TSSNSSGHET 240 LQNFTADKFT EEMKEEQEVP VDAGEVSSLP ELTMKIPEPA TGRQLPSLPE LQVPSHGSFD 300 WSQDPFINQL RSPWLEQWSP LYAQMLNF

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	3e-50	55	209	19	167	NO APICAL MERISTEM PROTEIN
1ut4_B	3e-50	55	209	19	167	NO APICAL MERISTEM PROTEIN
1ut7_A	3e-50	55	209	19	167	NO APICAL MERISTEM PROTEIN
1ut7_B	3e-50	55	209	19	167	NO APICAL MERISTEM PROTEIN
4dul_A	3e-50	55	209	19	167	NAC domain-containing protein 19
4dul_B	3e-50	55	209	19	167	NAC domain-containing protein 19
Search in ModeBase

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020599997.1	0.0	NAC domain-containing protein 35-like
Swissprot	Q10S65	1e-102	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	A0A2I0W0W6	1e-129	A0A2I0W0W6_9ASPA; NAC domain-containing protein 94
STRING	XP_008813634.1	1e-117	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1770	38	105

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-85	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]