PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PEQU_02011

Organism

Phalaenopsis equestris

Taxonomic ID

78828

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis

Family

Nin-like

Protein Properties

Length: 803aa MW: 89814.9 Da PI: 6.2809

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PEQU_02011	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.8	2.1e-28	520	570	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++s+++l++yF++++kdAA+++gvc+T+LKriCRq+GI RWP+Rkik++ PEQU_02011 520 EKTVSMQVLRQYFAGSLKDAARSIGVCPTTLKRICRQHGITRWPSRKIKKV 570 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.677	507	590	IPR003035	RWP-RK domain
Pfam	PF02042	1.9E-24	522	570	IPR003035	RWP-RK domain
SuperFamily	SSF54277	2.49E-23	706	801	No hit	No description
Gene3D	G3DSA:3.10.20.240	1.3E-23	713	798	No hit	No description
SMART	SM00666	4.4E-27	717	800	IPR000270	PB1 domain
PROSITE profile	PS51745	23.855	717	800	IPR000270	PB1 domain
CDD	cd06407	3.33E-38	718	798	No hit	No description
Pfam	PF00564	1.2E-18	719	799	IPR000270	PB1 domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence Send to blast
MDDFLISGLL ESPRYSDHLG TFSSRSPLAS PAFSPLIELN NIVSNPVIPD TKIQEGEEET 60 EKSFIFPNPA QNGTQRDDGG ESINPGETNS TPVLDSKQWI QPSIPISLQE RLTYALNRIR 120 ESQACGNVLV QIWIPVIVGE RCFLSTFGQP FILDQNCHNL IQYRTVSMNY RFAAEKNSTD 180 AAGLPGRVFA RRVPEWTPDV RYFASHEFPR VMDAQRCNVR GTIALPIFEM NSHLCLGVVE 240 VVSTAQKINY HSDVESICNA LQAVDLKISD DHSIKFLKAK NDSYMAALPE IIELLKFVCD 300 KHKLPLAQTW IPCLQQGKSG SRRDCVSTID EACYLNDPSV LGFHEACSEH HLFRGQGVTG 360 KAFTTNQPCF SPDIKAFSQM EYPLSHHAKI FDLQAAVAIR LRSNCAGTTD FVLEFFLPIS 420 CREPEEQRRM LDSLSITVQQ LCKSLMVIST KELDEENYSR VRSVAAPLSG FVETEPSCSA 480 SIIELDREED GSSPLTSMRL EFSNESEKLR FSGKKRTKME KTVSMQVLRQ YFAGSLKDAA 540 RSIGVCPTTL KRICRQHGIT RWPSRKIKKV DHSLRKLQVV IDSVQGGEGT FPFSTFYENL 600 TEPSGLETNS SERDLLSQVE VKCSPYIFAS NSASSSGSQV SSSSLSDSIC SRQVTDALQL 660 QIKHEANMDE RQISSLKRPH SLVKPTVSAQ QPSKSMAKPM IQTGISERPS LMSHQNMLRV 720 KAIYGEEMVR IRLQPDWGLM DLRKEIASRF NMSDSNSITL KYLDDDSEWI LLTCDADLEE 780 CVDIYRSSGA QIVKVSVQSA SNN

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence Send to blast

MDDFLISGLL ESPRYSDHLG TFSSRSPLAS PAFSPLIELN NIVSNPVIPD TKIQEGEEET  60
EKSFIFPNPA QNGTQRDDGG ESINPGETNS TPVLDSKQWI QPSIPISLQE RLTYALNRIR  120
ESQACGNVLV QIWIPVIVGE RCFLSTFGQP FILDQNCHNL IQYRTVSMNY RFAAEKNSTD  180
AAGLPGRVFA RRVPEWTPDV RYFASHEFPR VMDAQRCNVR GTIALPIFEM NSHLCLGVVE  240
VVSTAQKINY HSDVESICNA LQAVDLKISD DHSIKFLKAK NDSYMAALPE IIELLKFVCD  300
KHKLPLAQTW IPCLQQGKSG SRRDCVSTID EACYLNDPSV LGFHEACSEH HLFRGQGVTG  360
KAFTTNQPCF SPDIKAFSQM EYPLSHHAKI FDLQAAVAIR LRSNCAGTTD FVLEFFLPIS  420
CREPEEQRRM LDSLSITVQQ LCKSLMVIST KELDEENYSR VRSVAAPLSG FVETEPSCSA  480
SIIELDREED GSSPLTSMRL EFSNESEKLR FSGKKRTKME KTVSMQVLRQ YFAGSLKDAA  540
RSIGVCPTTL KRICRQHGIT RWPSRKIKKV DHSLRKLQVV IDSVQGGEGT FPFSTFYENL  600
TEPSGLETNS SERDLLSQVE VKCSPYIFAS NSASSSGSQV SSSSLSDSIC SRQVTDALQL  660
QIKHEANMDE RQISSLKRPH SLVKPTVSAQ QPSKSMAKPM IQTGISERPS LMSHQNMLRV  720
KAIYGEEMVR IRLQPDWGLM DLRKEIASRF NMSDSNSITL KYLDDDSEWI LLTCDADLEE  780
CVDIYRSSGA QIVKVSVQSA SNN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020570989.1	0.0	LOW QUALITY PROTEIN: protein NLP1-like, partial
TrEMBL	A0A2I0B006	0.0	A0A2I0B006_9ASPA; Protein NLP1
STRING	XP_008781315.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5554	38	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-175	Nin-like family protein