PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PEQU_01814 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 222aa MW: 24837.7 Da PI: 8.5683 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 61.5 | 1.6e-19 | 26 | 63 | 1 | 38 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkv 38 kprlrWt eLH+rFv+ v+qLGG++kAtPk+il++m+ PEQU_01814 26 KPRLRWTAELHDRFVDSVTQLGGPDKATPKAILRIMNK 63 79**********************************96 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 6.7E-17 | 23 | 63 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 5.7E-14 | 26 | 64 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 6.63E-7 | 26 | 62 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:3.20.20.10 | 3.2E-6 | 88 | 164 | IPR029066 | PLP-binding barrel |
Pfam | PF02784 | 1.6E-4 | 88 | 164 | IPR022644 | Orn/DAP/Arg decarboxylase 2, N-terminal |
SuperFamily | SSF51419 | 8.5E-8 | 88 | 168 | IPR029066 | PLP-binding barrel |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003824 | Molecular Function | catalytic activity |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 222 aa Download sequence Send to blast |
MYMNAGELEA TSLPVDARLV LTSDPKPRLR WTAELHDRFV DSVTQLGGPD KATPKAILRI 60 MNKYRMGKQL SKDLEGPNDG ISLATSPSLQ NSVGEAARIY YMLAKLGAVM HAIDIGGGLN 120 IYFDETHSSC SDMCVGYRLD EYACTVVRAI QYACNRKQVC HLVIYNESML AISSIRPSSK 180 VFFCTRSSGI FPATGPPPEP FIQEMLRRRE EPFLQEKLRR RA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP3427 | 38 | 73 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24120.1 | 1e-26 | G2-like family protein |