PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_01799
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family Trihelix
Protein Properties Length: 424aa    MW: 47815.3 Da    PI: 10.1286
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_01799genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix88.95.8e-281493186
    trihelix  1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                rW++qe++aL+++r++m++ ++++  k+plWeevs+k+re+g++rs+k+Ckek++n+ k+yk++ke + ++      ++++f+qle
  PEQU_01799 14 RWPRQETMALLKIRSDMDSVFQEATPKAPLWEEVSRKLREEGYQRSAKKCKEKFDNVFKYYKRTKEARAGK------SYRFFSQLE 93
                8******************************************************************9984......599999998 PP
2trihelix1071.3e-33334419187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW+k+ev+aLi++r  me+r++++  k+plWee+s+ m + g++rs+k+Ckekwen+nk++kk+ke++k+r  e+ +tcpyf+ql+a
  PEQU_01799 334 RWPKSEVHALIKLRGGMESRYQESIPKGPLWEEISAGMLRLGYNRSAKRCKEKWENINKYFKKVKESNKNR-REDAKTCPYFHQLDA 419
                 8*********************************************************************8.77888********85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007171.41173IPR001005SANT/Myb domain
PfamPF138375.3E-201395No hitNo description
CDDcd122033.69E-231378No hitNo description
PROSITE profilePS500906.981371IPR017877Myb-like domain
PROSITE profilePS500907.073327391IPR017877Myb-like domain
SMARTSM007170.31331393IPR001005SANT/Myb domain
PfamPF138375.3E-23333420No hitNo description
CDDcd122037.41E-27333398No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
GESEGGCGSP AGNRWPRQET MALLKIRSDM DSVFQEATPK APLWEEVSRK LREEGYQRSA  60
KKCKEKFDNV FKYYKRTKEA RAGKSYRFFS QLEALAPLPP PPPPTSAAAA PSQHTLFSIN  120
VPRPPPAVAA PPTIPKIAPP STDAAHGPSS SSNTSSFSGT ESEGEEEGET SRKRKRKLRG  180
GGEEEASEGS GKMMAFFESL IHKVMDQQDK MLQRFLEAIE RREQNRMIRE EAWRRQEKSR  240
LSREHELAAQ ERAAKASRDD AIFSFLQKLT GQKIPIPPPP QPLPITVIPA EETPTSPPPP  300
PPPPMPPENP HMPPKETTLV PSSRTTTEPL LSSRWPKSEV HALIKLRGGM ESRYQESIPK  360
GPLWEEISAG MLRLGYNRSA KRCKEKWENI NKYFKKVKES NKNRREDAKT CPYFHQLDAL  420
YRNK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1171176RKRKRK
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds specific DNA sequence. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020599236.10.0LOW QUALITY PROTEIN: trihelix transcription factor GTL1-like
SwissprotQ391171e-107TGT2_ARATH; Trihelix transcription factor GT-2
TrEMBLA0A3L6ET651e-139A0A3L6ET65_MAIZE; Trihelix transcription factor GT-2
TrEMBLC0HFU91e-139C0HFU9_MAIZE; Trihelix transcription factor GT-2
STRINGGRMZM2G414159_P011e-140(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60638175
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.18e-70Trihelix family protein