PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_01450
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family HRT-like
Protein Properties Length: 448aa    MW: 49911.2 Da    PI: 9.6398
Description HRT-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_01450genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HRT-like47.92.2e-15261291131
    HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                 iCG+++++G +C +qP +gRKRC+eHKG++i
  PEQU_01450 261 ICGIATGHGLICIKQPLPGRKRCAEHKGRKI 291
                 8***************************997 PP

2HRT-like45.11.6e-14357387131
    HRT-like   1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                 iCGv  +dG vCkr Pv gRKRCe HKG+R+
  PEQU_01450 357 ICGVVCGDGCVCKRRPVLGRKRCESHKGQRV 387
                 8*****************************7 PP

3HRT-like54.81.6e-17407436231
    HRT-like   2 CGviledGsvCkrqPvkgRKRCeeHKGmRi 31 
                 CGvi ++G  C+r+Pv+gRKRCeeHKG+Ri
  PEQU_01450 407 CGVINGNGYACSRPPVPGRKRCEEHKGRRI 436
                 *****************************7 PP

Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:2000033Biological Processregulation of seed dormancy process
GO:0097100Molecular Functionsupercoiled DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    Send to blast
MRLKREDCDL TKHDFIFSKW EILIGPNDWK DHASGKDGVE RYRIHNLPAA SSCTGLYELG  60
VASIPTTEGH RLRKLDWENV IVVYLGQADN VRTRLQEYGR SGSHLDHGNL ITHRKNSESS  120
SAVGLGLFKD IFSKGYSIMF RWAPIKSKME AEKIEIQLLR IFDYAWNRKG NGMCRHAEIL  180
AMLVQNSPNS GHSPLRRLLQ WKQKTFSKRE GINIDSVVPF SEKLAPSPGL KGFLLPGILK  240
FSSSQLQFLP QDINSVNDQI ICGIATGHGL ICIKQPLPGR KRCAEHKGRK ITASGSASGR  300
MTSSCDIFLE DGTKGCEFSD GRRVTIPLLD EVVSPSQQYQ SQLAQEKFHH DKEENVICGV  360
VCGDGCVCKR RPVLGRKRCE SHKGQRVLAA VPSVDKILNS LPLNNFCGVI NGNGYACSRP  420
PVPGRKRCEE HKGRRIVSAG NINVSRAE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020583664.10.0protein EFFECTOR OF TRANSCRIPTION 2-like
TrEMBLA0A2I0XD350.0A0A2I0XD35_9ASPA; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79483443
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56780.11e-76effector of transcription2