PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00917
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 301aa    MW: 34100.9 Da    PI: 9.495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00917genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.21.9e-10123168454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  h   ErrRR+r+N +f+ L +llP+       K +K ++L  +v YIk L
  PEQU_00917 123 QHMVSERRRRERLNASFHSLWQLLPPV-----SKKDKTSVLCNTVSYIKTL 168
                 68889*********************5.....4999*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.297119168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-14120184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.32E-7121172No hitNo description
Gene3DG3DSA:4.10.280.108.9E-13122186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.6E-8123168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.7E-8125174IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010200Biological Processresponse to chitin
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MVTDQSMLPT SMANQHSFLL STMEDMALTR AMVSVISSSS TPSSSSSATT YQRAQTSQKQ  60
ANYYPSMSSF QPYSSSKPPL MESHKNFHSQ NMIKKSHNML RNVNMLKDKG KVEETQPSAY  120
QMQHMVSERR RRERLNASFH SLWQLLPPVS KKDKTSVLCN TVSYIKTLKD EIYELEGNNR  180
TVEENIFTNT EFNEKSMKQN ENVRVRISKS SETLSGEIQQ IELVIMVRSV QCDLIRVLLQ  240
VLESIKAMEA ISLLSFDAVH NSQQLKLLAT LRLAIQGSTW DERTFKEAVA GAAHMALTMT  300
A
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1127132ERRRRE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020592090.10.0putative transcription factor bHLH041
TrEMBLA0A2I0V8F11e-152A0A2I0V8F1_9ASPA; Transcription factor bHLH041
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP101743136
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.11e-25bHLH family protein