PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00716
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family BES1
Protein Properties Length: 633aa    MW: 72699.9 Da    PI: 7.4838
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00716genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822133.91.7e-4163156295
      DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 
                 g++r+++ +E+E++k+RER+RRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++  s+p++++     s s   ++sl+
  PEQU_00716  63 GGRRSRPKEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSSPTSSQVPLSLSLSCRLSTSLS 156
                 7899***********************************************************************8888777777777777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056871.8E-3763156IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514453.55E-141220586IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.806.1E-139223508IPR013781Glycoside hydrolase, catalytic domain
PfamPF013735.7E-77230507IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.2E-40260274IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.2E-40281299IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.2E-40303324IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.2E-40396418IPR001554Glycoside hydrolase, family 14
PRINTSPR007501.2E-40469488IPR001554Glycoside hydrolase, family 14
Gene3DG3DSA:3.20.20.807.5E-17510585IPR013781Glycoside hydrolase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    Send to blast
VAREMERLVG TSEEEDMEMD LEVKEEDEDD ERSRRLIAAE EMGGRFFEEE SASGDQIHIH  60
GMGGRRSRPK EEKERTKLRE RHRRAITARI LAGLRRHGNY NLRVRADIND VIAALAREAG  120
WVVLPDGTTF PSRSSPTSSQ VPLSLSLSCR LSTSLSSLCH ALSFWIYSHY SKLLTLLIIK  180
MKPLKTFCRR QYPHRQYVNH SVSTQCCSFP VFGIFYQRDF AGTPYVPVNV MLPLGVINTK  240
CELVDPESLM KQLRILKSIN IDGVTVDCWW GIVEAHAPQE YNWHGYKRLF QIVRELKLKL  300
QVVMSFHECG GNIGDDVCIP LPHWVAEIGR SNPDIFFTDR EGRRNPECLS WGIDKERVLR  360
GRTALEVYFD YMRSFRVEFD ELFEDGIISA VEVGLGPCGE LRYPSHPVKH GWRYPGIGEF  420
QCYDQYLIKS LRKAAEARGH LFWARGPENA GSYNSRPQET AFFCDGGEYD GYYGRFFLGW  480
YSQFLVDHAD HVLSLAKLAF EGTCIAAKAN VLNAAWDACI PVASVNSFPS FDRDCYNKIL  540
ENAKPPNDPD GRHLSSFTYL RLSSVLMEGC NFSEFERFVK RMHGKDYPSF ARILFLGTKH  600
CFTLVFYYIS PNYDFRYCPF DVFLGPKCKN KKS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1q6d_A1e-10222551611301beta-amylase
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022862321.10.0beta-amylase 7-like isoform X2
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLA0A2I0WX380.0A0A2I0WX38_9ASPA; Beta-amylase
STRINGXP_010255371.10.0(Nelumbo nucifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21413663
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]