PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00313
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family MYB
Protein Properties Length: 281aa    MW: 31583.5 Da    PI: 8.9694
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00313genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.15.6e-102269247
                     SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     g+WT++E +l+ +a + +  +   +W ++a +++ g+t +++ s+++++
       PEQU_00313 22 GNWTQQENKLFENALAHFDRDtpdRWMRVAGMIP-GKTVEDVMSHYHDL 69
                     89*****************99*************.***********976 PP
2Myb_DNA-binding49.11.3e-15129173347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+++++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
       PEQU_00313 129 PWTEEEHKRFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 173
                      8*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.8E-41869IPR009057Homeodomain-like
PROSITE profilePS512938.3721972IPR017884SANT domain
SMARTSM007177.2E-82072IPR001005SANT/Myb domain
SuperFamilySSF466898.97E-122277IPR009057Homeodomain-like
PfamPF002495.9E-82269IPR001005SANT/Myb domain
CDDcd001671.23E-52369No hitNo description
PROSITE profilePS5129420.122122178IPR017930Myb domain
SuperFamilySSF466891.5E-17124178IPR009057Homeodomain-like
TIGRFAMsTIGR015574.2E-18125176IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.0E-12126172IPR009057Homeodomain-like
SMARTSM007177.4E-13126176IPR001005SANT/Myb domain
CDDcd001676.20E-11129174No hitNo description
PfamPF002494.9E-13129173IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    Send to blast
MEVLNPAYLS NSNWLIGEKK SGNWTQQENK LFENALAHFD RDTPDRWMRV AGMIPGKTVE  60
DVMSHYHDLE EDVTCIEAGL VPFPGYNSSS FTLDWESGHG FDEVKHAYSI SVKRPGTRLI  120
DHERKKGVPW TEEEHKRFLM GLKKYGKGDW RNISRNFVVT RTPTQVASHA QKYFIRLNSG  180
SKDKRRASIH DITMVNVEDS RPPSPSQSCS ATAPATAENF SVVVDSKKPN EVVKGFSASP  240
DKTRLVQPPY GIQPYGMKLQ AHNLNNGNLN GSAMGHHGVL F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2cjj_A1e-1824891176RADIALIS
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtInvolved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00296DAPTransfer from AT2G38090Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020600036.10.0transcription factor DIVARICATA-like
SwissprotQ8S9H77e-98DIV_ANTMA; Transcription factor DIVARICATA
TrEMBLA0A2I0XHB51e-168A0A2I0XHB5_9ASPA; Transcription factor DIVARICATA
TrEMBLA0A482DP021e-169A0A482DP02_9ASPA; DIVARICATA 2 (Fragment)
STRINGXP_008785419.11e-128(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22743796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.12e-94MYB family protein
Publications ? help Back to Top
  1. Galego L,Almeida J
    Role of DIVARICATA in the control of dorsoventral asymmetry in Antirrhinum flowers.
    Genes Dev., 2002. 16(7): p. 880-91
    [PMID:11937495]
  2. Almeida J,Rocheta M,Galego L
    Genetic control of flower shape in Antirrhinum majus.
    Development, 1997. 124(7): p. 1387-92
    [PMID:9118809]