PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_00093
Organism
Phalaenopsis equestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family bHLH
Protein Properties Length: 440aa    MW: 48599.9 Da    PI: 6.9986
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_00093genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH53.73.8e-17187236255
                 HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r +h++ E+rRR++iN++f+ Lr llP++    ++K +Ka+ L +++eYI+ Lq
  PEQU_00093 187 RSKHSATEQRRRSKINDRFQILRGLLPNS----DQKRDKASFLLEVIEYIQFLQ 236
                 889*************************9....9*******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.103.7E-22185258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.888185235IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-18186250IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.2E-14187236IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.37E-16187240No hitNo description
SMARTSM003533.6E-13191241IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
DFLSLYTKDS SCQLQDSRSH PPQGFLMKTT HDFLQPLETA ENEKARRGPT QRTTHVLPGG  60
IGTYSISHVS SGASTFAAVK PESNTCGPDA AYAFPVWDAA KTAGPTTGSV CPCSSQWILR  120
ALKISSRSSQ FPDKKQRFME SASRFSKGLD DDDDDDEELG RRESSSHKEL TGKSDGKTGE  180
QKACTPRSKH SATEQRRRSK INDRFQILRG LLPNSDQKRD KASFLLEVIE YIQFLQEKLQ  240
KYESSYPGWS DETVKLMPWV KVYFRSFWKN ARNNNHGSGD GMVDPQVLKN GTSSGLMVSD  300
SSIPVAPSIL SSAQNPTESE LIAGVSYKEL ENPNGFSRSQ SEWLRSSFHT GCTASNDEIN  360
EQELIIDEGT ITVSSEYSQG LLNSLSQALQ NSGVDLSQAS ISVHINLGRR ASVSRRNASS  420
MATPKVYAYA PVIFFNIVYD
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00219DAPTransfer from AT1G69010Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020576868.10.0transcription factor BIM2-like isoform X1
TrEMBLA0A2H3XUF11e-146A0A2H3XUF1_PHODC; transcription factor BIM2 isoform X5
STRINGXP_008788920.11e-146(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP76237128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.15e-50BES1-interacting Myc-like protein 2