PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s984861g008
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 351aa    MW: 40223.8 Da    PI: 7.098
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s984861g008genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.94e-3255108255
            G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+
  PDK_30s984861g008  55 PRLRWTPDLHLCFVRAVERLGGQDRATPKLVLQLMNVKGLSISHVKSHLQMYRS 108
                        9****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.1E-3051109IPR009057Homeodomain-like
PROSITE profilePS5129412.95351111IPR017930Myb domain
SuperFamilySSF466892.33E-1553109IPR009057Homeodomain-like
TIGRFAMsTIGR015576.6E-2454110IPR006447Myb domain, plants
PfamPF002492.9E-956107IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    Send to blast
MAKNLSEKST DKEEDEEDCD ENARNGRSSS NSTTDESKKK LNSGFVRQYI RSNNPRLRWT  60
PDLHLCFVRA VERLGGQDRA TPKLVLQLMN VKGLSISHVK SHLQMYRSKK IDESDRDDSR  120
NTIEGRARHA YILSHLPALQ GFPQRPQTFS SREFRSTMDL GSHSSAAEMI FKGHHRMMDI  180
RDIHMGSLTP NDPASGELHG TFEDFHLLYD HKIERPQFRP RGMEPCFISQ WHERGIEQAT  240
RFSNTCTQEI EQQRTTSSLS LGGCFAMRWK DDDHEPDLDL SLNVTPRYEK RKRYWENEEV  300
DSSLSLSLIS PSSKLEGCSR DVEKASKHIS LKEKDGSGEH ARGTSTLDLT I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A3e-1756110357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-1756110357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-1756110357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-1756110357Protein PHOSPHATE STARVATION RESPONSE 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00301DAPTransfer from AT2G40260Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008794301.10.0uncharacterized protein LOC103710387
TrEMBLA0A2H3Y6S50.0A0A2H3Y6S5_PHODC; uncharacterized protein LOC103710387
STRINGXP_008794301.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44083671
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-44G2-like family protein