PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s951241g002
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 445aa    MW: 49661.7 Da    PI: 6.0226
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s951241g002genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like94.11.1e-29211265155
            G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                        k r++Wt+eLHe+Fv+av+ LGG+++AtPk i+  m+++gLt +hvkSHLQkYRl
  PDK_30s951241g002 211 KSRMQWTQELHESFVQAVNDLGGADRATPKCIVIKMGIPGLTKDHVKSHLQKYRL 265
                        68****************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.2E-26210268IPR009057Homeodomain-like
SuperFamilySSF466891.56E-14210266IPR009057Homeodomain-like
TIGRFAMsTIGR015576.1E-23211266IPR006447Myb domain, plants
PfamPF002492.1E-7213264IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MTYHASRNVG SSMFGSEWNM SLPVANIPTN WHGPSGLNEE NVPTTMPDIH EIGSYQQPCS  60
PLLVSLIHQE GLNQCHSLPN LTSSSSTSTK STDICLQSSI HYTDRYASSS SALEQYPYSG  120
NMFPLLQIHL SSMQTSAPTS LQGLGLTYQP NEDAQIPGDI DDILPSAVEQ EHRMESDQPK  180
QIILSNGNQD RYEIIGVNQE AQVSEVNVGN KSRMQWTQEL HESFVQAVND LGGADRATPK  240
CIVIKMGIPG LTKDHVKSHL QKYRLSRYRS EGKEDKRPSC PEGKKRNATE DSGNPNLSSN  300
ESETLHMQWK LQKTLHEQLK WQYYCANVVM ALNIIRKLQL QTKENGRQLQ KFMEDQYKVR  360
EAFFQATQSM SMTKGVATEG TLAPFSSDKL PVSLDEEHSM KDGMLSDLAK LDVSIDVELA  420
SLSYKRARID AESSKATISG NVFQL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-20211269260Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-20211269260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-20211269260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-20211269260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-20211269260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-20211269260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-20211269260Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-20211269260Protein PHOSPHATE STARVATION RESPONSE 1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026663015.10.0myb family transcription factor PHL5-like
RefseqXP_026663239.10.0myb family transcription factor PHL5-like
TrEMBLA0A2H3YKJ30.0A0A2H3YKJ3_PHODC; myb family transcription factor PHL5-like
STRINGXP_008799117.10.0(Phoenix dactylifera)
STRINGXP_008799992.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5085722
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04450.24e-32G2-like family protein