PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s927771g007

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Dof

Protein Properties

Length: 461aa MW: 49839.6 Da PI: 7.6703

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s927771g007	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.4	7.8e-39	110	169	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+s PDK_30s927771g007 110 PDKILPCPRCSSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSS 169 7899*****************************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	2.0E-30	103	167	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.3E-31	112	168	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.612	114	168	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	116	152	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence Send to blast
MAESRDLAIK LFGKTIPLQP TGESPPVSGG SEESGGKAEK DHKEAATPET KDQDMESPDS 60 EEKSDPPTPT AGETDKLSSG NQEDTNMKDS TPKEQSNETS NSQEKAPKKP DKILPCPRCS 120 SLDTKFCYFN NYNVNQPRHF CKNCQRYWTA GGTMRNVPVG AGRRKNKSSI PHYRHIAMSD 180 ATLQAVRSDA MEAIHHPPIK PNGTVLSFGS DMPLCESMAS ALNLAEKNMK NCTRNGYHQM 240 EEKTVPLPCR AENGDEHSSG SSVMAPNSKQ EAAKTSLQGV PAPIPCFNGT PWAYQWNPAA 300 PLCTSSFAIP FYPAPAYWGC AVPGSWSFPW LSPLASSPPP PNSGSPGSGP NSPTLGKHSR 360 DGNILKSSNL EKEDGLTQTN QERCIWAPKT LRIDDADEAA KSSIWAMIGI KNDKAGAVSG 420 RGIFKAFQPK AGIKNHTNET SQLLHANPAA LSRSLRFQES S

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence Send to blast

MAESRDLAIK LFGKTIPLQP TGESPPVSGG SEESGGKAEK DHKEAATPET KDQDMESPDS  60
EEKSDPPTPT AGETDKLSSG NQEDTNMKDS TPKEQSNETS NSQEKAPKKP DKILPCPRCS  120
SLDTKFCYFN NYNVNQPRHF CKNCQRYWTA GGTMRNVPVG AGRRKNKSSI PHYRHIAMSD  180
ATLQAVRSDA MEAIHHPPIK PNGTVLSFGS DMPLCESMAS ALNLAEKNMK NCTRNGYHQM  240
EEKTVPLPCR AENGDEHSSG SSVMAPNSKQ EAAKTSLQGV PAPIPCFNGT PWAYQWNPAA  300
PLCTSSFAIP FYPAPAYWGC AVPGSWSFPW LSPLASSPPP PNSGSPGSGP NSPTLGKHSR  360
DGNILKSSNL EKEDGLTQTN QERCIWAPKT LRIDDADEAA KSSIWAMIGI KNDKAGAVSG  420
RGIFKAFQPK AGIKNHTNET SQLLHANPAA LSRSLRFQES S

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008806017.1	0.0	cyclic dof factor 2
Refseq	XP_026664978.1	0.0	cyclic dof factor 2
TrEMBL	A0A2H3YYY8	0.0	A0A2H3YYY8_PHODC; cyclic dof factor 2
STRING	XP_008806017.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2099	37	93

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	1e-91	cycling DOF factor 2