PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s912911g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | WRKY | ||||||||
Protein Properties | Length: 222aa MW: 24977.4 Da PI: 8.3687 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 54.1 | 3.2e-17 | 34 | 70 | 22 | 58 |
EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS WRKY 22 rsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58 rsYYrC+ ++C++kk+vers edp++++itYeg H h PDK_30s912911g001 34 RSYYRCSNPRCNAKKQVERSIEDPEMLIITYEGLHLH 70 9**********************************99 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00774 | 1.1E-8 | 32 | 72 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.6E-12 | 32 | 70 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.22E-13 | 33 | 71 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 6.9E-15 | 33 | 71 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 14.883 | 34 | 73 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence Send to blast |
MTKWWSCMHV PIFTPIIKYA HRKILPLLIC LPNRSYYRCS NPRCNAKKQV ERSIEDPEML 60 IITYEGLHLH YAYSHFLFPQ RQGNSATSLP APKKPKVQQA QDLENPKVRP TKPEASTTTQ 120 QQQQQQQLVI TGEKSSQGRL LGDAPPSRVL REEGIPADDN AQCPQGLLED IVPLLVRNPC 180 NSTTSAYDPQ TSSQATSLHY PSSHSWPPDS AHLDVGILSN MI |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008785604.1 | 1e-126 | probable WRKY transcription factor 49 | ||||
TrEMBL | A0A2H3XLJ0 | 1e-125 | A0A2H3XLJ0_PHODC; probable WRKY transcription factor 49 | ||||
STRING | XP_008785604.1 | 1e-126 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7525 | 35 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43290.1 | 1e-17 | WRKY DNA-binding protein 49 |