PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s830191g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | BES1 | ||||||||
Protein Properties | Length: 150aa MW: 15670.5 Da PI: 4.1755 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 57.7 | 5.3e-18 | 1 | 110 | 47 | 134 |
DUF822 47 nneVlkALcreAGwvvedDGttyr..............kgskpl....eeaeaagssasaspesslq.sslkssalaspvesysaspksssf 119 +n+Vl+AL+reAGw+ve+DGttyr + + + +s+es+l+ +slk+s++++ ++s+++ ++ +++ PDK_30s830191g001 1 MNDVLAALAREAGWIVEPDGTTYRpssvspspsvavaaP----AphppPPPTQLAPFPVRSIESPLStNSLKNSSMKASLDSQASLLRIDES 88 7***********************766555555544221....12233566677778889******999*********************** PP DUF822 120 pspssldsislasa.......a 134 +sp+slds+ +a+ a PDK_30s830191g001 89 LSPASLDSVVVAERdargekcA 110 *********9998744443333 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 5.0E-19 | 1 | 115 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 150 aa Download sequence Send to blast |
MNDVLAALAR EAGWIVEPDG TTYRPSSVSP SPSVAVAAPA PHPPPPPTQL APFPVRSIES 60 PLSTNSLKNS SMKASLDSQA SLLRIDESLS PASLDSVVVA ERDARGEKCA NASPINSPEC 120 VEADQLMRDS AEGEGGFGET PYIPVYAMLP |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008803967.1 | 1e-102 | beta-amylase 8-like | ||||
Swissprot | Q9FH80 | 3e-34 | BAM8_ARATH; Beta-amylase 8 | ||||
TrEMBL | A0A2H3YUE3 | 1e-101 | A0A2H3YUE3_PHODC; beta-amylase 8-like | ||||
STRING | XP_008803966.1 | 4e-78 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2141 | 36 | 63 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G45300.1 | 1e-32 | beta-amylase 2 |
Publications ? help Back to Top | |||
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