PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s826981g003 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | NAC | ||||||||
Protein Properties | Length: 205aa MW: 23693.9 Da PI: 9.512 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.8 | 9.2e-49 | 11 | 137 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 pGfrFhPt+eel+++yL++ v gkkl++ ++i ++++y+++Pw+Lp ++ +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d+++ s PDK_30s826981g003 11 PGFRFHPTEEELLDFYLRRVVLGKKLNF-DIIGTLNLYRYDPWELPGLANIGEREWYFFVPRDRKSGNGGRPNRTTERGFWKATGSDRQIRS 101 9*************************99.99***************8888899**************************************9 PP NAM 95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++l+glkktLvfy+grap+g+ktdWvm+eyrl PDK_30s826981g003 102 AadPKRLIGLKKTLVFYQGRAPRGTKTDWVMNEYRL 137 8777788***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 51.159 | 9 | 163 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.42E-54 | 10 | 143 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-25 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MEGGGSELDL PGFRFHPTEE ELLDFYLRRV VLGKKLNFDI IGTLNLYRYD PWELPGLANI 60 GEREWYFFVP RDRKSGNGGR PNRTTERGFW KATGSDRQIR SAADPKRLIG LKKTLVFYQG 120 RAPRGTKTDW VMNEYRLPDT PHSTANSIPP KKEVEVTSTS VRQVNLPGID VPKYSPDCWL 180 QDPFLTQMRS PWLDQWSPYA NLLNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 8e-48 | 6 | 137 | 11 | 140 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008791987.1 | 1e-109 | NAC domain-containing protein 22-like | ||||
Swissprot | Q10S65 | 6e-86 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2H3Y1W8 | 1e-108 | A0A2H3Y1W8_PHODC; NAC domain-containing protein 22-like | ||||
STRING | XP_008791987.1 | 1e-109 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1770 | 38 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-75 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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