PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s781201g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Nin-like

Protein Properties

Length: 277aa MW: 30084.9 Da PI: 8.9938

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s781201g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	44.7	2.6e-14	220	266	2	48
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRk 48 k+++ e+l++ F+lp kdAA++Lg++lT+ +C +GIk WP+ + PDK_30s781201g001 220 RKNVTGEELQQLFHLPRKDAARKLGMSLTTFRLRCGDHGIKPWPYKQ 266 6899****************************************975 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	13.651	210	277	IPR003035	RWP-RK domain
Pfam	PF02042	6.4E-14	222	266	IPR003035	RWP-RK domain

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence Send to blast
QTDALEQENV LSRYLNSPES PLDSPLLAGP AEPFSPSLPP VPNNGVEPLL YPQSSCSPLQ 60 RPDESFPPPV AGDDFISLLS PYLLPALAQE NVPFRYPHST EPPLGPQSSR SSSFPGQAES 120 FPPSLPPVFS NDVGLASYQA AAPENVPSWT VEITKSLIRE SDLPPETVLG GSSQLSSAYA 180 SGTEGRGGLT GPKKTGRAAK NFGSYSRRQP KTPKMHRERR KNVTGEELQQ LFHLPRKDAA 240 RKLGMSLTTF RLRCGDHGIK PWPYKQPVKR EAKPPGL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_026657426.1	1e-107	uncharacterized protein LOC113461521, partial
TrEMBL	A0A3Q0HS74	1e-105	A0A3Q0HS74_PHODC; uncharacterized protein LOC113461521

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	1e-06	Nin-like family protein