PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s769251g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | GeBP | ||||||||
Protein Properties | Length: 107aa MW: 12000.9 Da PI: 11.722 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 39.9 | 1.2e-12 | 15 | 88 | 2 | 77 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgke 77 +fqr w eDei++L++l+d +k g ps + f+++s+ +++s+ ql K++rL++ + ++k++k+ PDK_30s769251g001 15 AFQRSWLPEDEITILRALLDNSSKDGLLPSPRQR--HLFMRSSLRLQASDGQLACKVQRLRRSCGNAAVDMKKKKN 88 69************************99888655..55799********************998777666444443 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 3.8E-11 | 16 | 90 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 107 aa Download sequence Send to blast |
MSMAAGRRRR QPHPAFQRSW LPEDEITILR ALLDNSSKDG LLPSPRQRHL FMRSSLRLQA 60 SDGQLACKVQ RLRRSCGNAA VDMKKKKNEK TNACAGVQKQ AGLTTLT |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2671 | 35 | 87 |