PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s736671g001
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family MYB_related
Protein Properties Length: 328aa    MW: 34494.3 Da    PI: 4.8347
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s736671g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-0812352448
                       HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqkyl 48
                       W++Ia +++ gRt++++k++w+++l
  PDK_30s736671g001 12 WSLIAGHLP-GRTDNEIKNYWNSHL 35
                       *********.************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.726139IPR017930Myb domain
SuperFamilySSF466899.79E-71138IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.6E-121235IPR009057Homeodomain-like
PfamPF002492.4E-61235IPR001005SANT/Myb domain
CDDcd001672.88E-61235No hitNo description
PfamPF066401.1E-552171IPR010588Myb-related protein P, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
MADGNCGGEL WWSLIAGHLP GRTDNEIKNY WNSHLSRRVD SFQRLVGDGE VMTVDLSKLP  60
GGGKRRGGRT SRSAMRKNAV NGTTRRETNE KGISPPTSSA QAQSDEGRSM VLDPGQNQAS  120
CVTFEGLNQG ALDPNEDMVS GLLSPSPIES GLWGACSHEM EAILFGASED SSVGCGSHEE  180
RESGSSSEER EGGALVLHGD GDGGAMDLEE EGRGGGVIAQ GEEEVGFLPV KKVEVFRSIS  240
AVLRKKSCKA ALFVECISSD PQQRKQSNLR FTGSTILLKG IHAPDTLKWT GSLLPCASAM  300
IGPPGDKVAA DSGGPESSLS QDTSISCG
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010921536.11e-101transcription factor MYB111
TrEMBLA0A2H3XNH49e-84A0A2H3XNH4_PHODC; myb-related protein P-like
STRINGXP_008786362.12e-84(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP7938563
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.15e-15myb domain protein 111