PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s731031g002 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | ERF | ||||||||
Protein Properties | Length: 192aa MW: 21902.8 Da PI: 4.8638 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.8 | 6.3e-14 | 117 | 164 | 7 | 55 |
AP2 7 rwdkkrgrWvAeIrdpseng.kr..krfslgkfgtaeeAakaaiaarkkleg 55 r ++k+g+W A+I + g r k ++lg+f+t+eeAa+a++ a+ +l+g PDK_30s731031g002 117 R-RRKDGKWQARIGRV---GeSRdaKDIYLGTFDTEEEAAEAYDIAAIELRG 164 4.5559*******998...443347*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 6.8E-8 | 1 | 34 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.47E-6 | 1 | 33 | IPR016177 | DNA-binding domain |
PROSITE profile | PS51032 | 11.561 | 1 | 33 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 0.067 | 2 | 39 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 17.57 | 109 | 172 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.0E-16 | 117 | 172 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 2.09E-15 | 117 | 174 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 7.25E-21 | 117 | 174 | No hit | No description |
Pfam | PF00847 | 2.4E-8 | 117 | 164 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 1.1E-21 | 117 | 178 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 192 aa Download sequence Send to blast |
MGSYDSEEKA ARAHDLAALK YWGPSTNAKL NFPEIIYVNS SLDFLHVRMT LLVSFLDPQV 60 SDYEKELETM KTMSQEEYVA YKKQLFLKGS IDLQRSDEVD TNQICRPITL GGAFWLRRRK 120 DGKWQARIGR VGESRDAKDI YLGTFDTEEE AAEAYDIAAI ELRGVHAVTN FDISNYCEGG 180 LRRLEGPCKL EM |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008808053.1 | 1e-81 | AP2-like ethylene-responsive transcription factor AIL1 | ||||
TrEMBL | A0A2H3Z407 | 3e-80 | A0A2H3Z407_PHODC; AP2-like ethylene-responsive transcription factor AIL1 | ||||
STRING | XP_008808053.1 | 6e-81 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7864 | 35 | 48 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72570.1 | 6e-28 | AP2 family protein |