PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s730761g004 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | GeBP | ||||||||
Protein Properties | Length: 299aa MW: 33698.6 Da PI: 10.2146 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 117.2 | 9.1e-37 | 21 | 119 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkife 90 lfq+lw++ Dei++LqG+++f++++g+ ++++d+ fy+++k++++++++k+qlveK+rrLKkK++++v+++ sgke++f+++hd+ +fe PDK_30s730761g004 21 LFQKLWTDADEIAILQGFLEFTSQRGTthaNYQHDTGPFYDQIKNRLQVDFNKNQLVEKLRRLKKKYRNMVNRMGSGKEFVFKSPHDKATFE 112 79************************98867777********************************************************** PP DUF573 91 lskkiWg 97 +++kiW PDK_30s730761g004 113 IARKIWS 119 ******7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.1E-33 | 22 | 119 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence Send to blast |
MLLPGEERKR LAAAHDESRR LFQKLWTDAD EIAILQGFLE FTSQRGTTHA NYQHDTGPFY 60 DQIKNRLQVD FNKNQLVEKL RRLKKKYRNM VNRMGSGKEF VFKSPHDKAT FEIARKIWSP 120 SFKRTRSRDS GNAPNPQLQE SSNLVPVEIA EDVSLSSDHM ISRPRRRSRR RSEGAPEMDV 180 PMPTPVVSIP VLNHTPCSSA PIPNANLIEQ TVKSCLSPLF KELLQYAMGG PCAPVGAGDA 240 GAPLNPLLLN ITGGSGAVQA DEKWRKQQIL ELEVYLKRVE LVREQIKSKL EVLRSMGSS |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008807916.1 | 0.0 | probable transcription factor At3g04930 | ||||
TrEMBL | A0A2H3Z4D8 | 0.0 | A0A2H3Z4D8_PHODC; probable transcription factor At3g04930 | ||||
STRING | XP_008807916.1 | 0.0 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP974 | 37 | 123 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28040.1 | 1e-64 | DNA-binding storekeeper protein-related transcriptional regulator |