PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s723941g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | G2-like | ||||||||
Protein Properties | Length: 191aa MW: 21388.2 Da PI: 5.1959 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 46.1 | 1.1e-14 | 157 | 189 | 22 | 54 |
G2-like 22 GGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 GG AtPk+i+e+mkv+gLt+++vkSHLQ R PDK_30s723941g001 157 GGGVAATPKQIREMMKVDGLTNDEVKSHLQDCR 189 77888*************************988 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01557 | 4.0E-11 | 158 | 189 | IPR006447 | Myb domain, plants |
Gene3D | G3DSA:1.10.10.60 | 9.5E-11 | 158 | 190 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence Send to blast |
MDFAERARKC QEYVEALEEE RRKIEVFQRE LPLCLQLVTQ AIESIRMQIW SSEETVTDGP 60 VLEEFIPLKP TSSSTEEEKG GFMEMEQERS EKKPDWLRSV QLWNQETDHS LPKGDPPKRP 120 IAVNAKKIGG AFHPFERGKH APAAPAASSS TVGGGGGGGV AATPKQIREM MKVDGLTNDE 180 VKSHLQDCRI W |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_008782297.1 | 1e-110 | transcription factor NIGT1 | ||||
Swissprot | Q9FPE8 | 2e-48 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A2H3XDY4 | 1e-109 | A0A2H3XDY4_PHODC; transcription factor NIGT1 | ||||
STRING | XP_008782297.1 | 1e-109 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP6470 | 37 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 2e-36 | G2-like family protein |
Publications ? help Back to Top | |||
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