PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s713161g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

BES1

Protein Properties

Length: 266aa MW: 27360.1 Da PI: 6.3446

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s713161g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	28.1	6.7e-09	1	75	72	149
DUF822 72 gskpleeae..aagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa...asllpvlsvlslvsss 149 g+kp e+++ a+g s s sp++s+q +sp++sy++sp+sssfpspss+ +++ + +sl+p+l++ls++sss PDK_30s713161g001 1 GCKPVERMDvvAVGGSVSPSPCTSYQ--------PSPRASYNPSPASSSFPSPSSSYITNAYKGtdgNSLIPWLKNLSSASSS 75 68888666522679999*****99........****************9877766554677********997766 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.1E-10	1	70	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence Send to blast
GCKPVERMDV VAVGGSVSPS PCTSYQPSPR ASYNPSPASS SFPSPSSSYI TNAYKGTDGN 60 SLIPWLKNLS SASSSTSSSK LPNPHHLFIH GGSISAPVTP PLSSPTARSP RIKTDWDDSA 120 AQPPWAGAQY TFLPSSPPPS PGRQVLPDPA WLAGLRLPSG GPSSPTYSLV SSNPFGFFKE 180 ASAGAGSSRM LTPGQSGTCS PVPGGGHADV QMSDGISDEF AFGSSSNGDL PANGLVKPWE 240 GERIHEECAS DELELTLGSS RTRSGA

Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008796066.1	0.0	protein BZR1 homolog 3
Swissprot	Q5Z9E5	1e-100	BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBL	A0A2H3YAV7	0.0	A0A2H3YAV7_PHODC; protein BZR1 homolog 3
STRING	XP_008796066.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1366	38	112

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	3e-63	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]