PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s705791g001 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | WRKY | ||||||||
Protein Properties | Length: 175aa MW: 19957.5 Da PI: 8.5729 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.3 | 5.1e-31 | 97 | 155 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYG+K+vk++++pr+YYrC+s+gC+vkkkver++ed ++v +tYeg Hnh+ PDK_30s705791g001 97 LDDGYKWRKYGKKTVKNNPNPRNYYRCSSKGCMVKKKVEREREDSSYVLTTYEGLHNHD 155 59********************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.3E-33 | 84 | 157 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 8.89E-29 | 90 | 157 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 32.064 | 92 | 157 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.3E-35 | 97 | 156 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.0E-24 | 98 | 155 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence Send to blast |
MSSYCSLLSS NSSENDWPHD MLFEISNHPA FNEELQGAYS MPPPACQQNP FLLQANGTHV 60 KQTDAGDCTK NKNALKTALR ESSTKIAFKT KLEVEMLDDG YKWRKYGKKT VKNNPNPRNY 120 YRCSSKGCMV KKKVERERED SSYVLTTYEG LHNHDAPSPA ISCHLDFKHR THLIP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 4e-27 | 82 | 158 | 2 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 4e-27 | 82 | 158 | 2 | 78 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_026656313.1 | 3e-69 | probable WRKY transcription factor 75 isoform X1 | ||||
TrEMBL | A0A3Q0HNJ9 | 7e-68 | A0A3Q0HNJ9_PHODC; probable WRKY transcription factor 75 isoform X1 | ||||
STRING | XP_008810059.1 | 6e-84 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP441 | 37 | 206 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64810.1 | 2e-38 | WRKY DNA-binding protein 51 |