PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PDK_30s701911g003 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
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Family | G2-like | ||||||||
Protein Properties | Length: 138aa MW: 15580.6 Da PI: 7.0442 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 65.2 | 1.2e-20 | 76 | 122 | 4 | 51 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 ++WtpeLH+rFve+veqL G++kA+P++ilelm++++Lt+++v+ LQ PDK_30s701911g003 76 VDWTPELHRRFVEVVEQL-GIDKAVPSRILELMGIDCLTRHNVARDLQ 122 78****************.*************************9999 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 9.0E-18 | 75 | 122 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.4E-18 | 75 | 123 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 2.15E-11 | 76 | 122 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence Send to blast |
MVMRETRRWE AAGHPQKNSA TDSWEGTSSG TSTLMTSSPG TCCPTRRWTL RRSSRRSPFL 60 MTHEEESGTA TAVVEVDWTP ELHRRFVEVV EQLGIDKAVP SRILELMGID CLTRHNVARD 120 LQVPSLQATF LTSDKLEH |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2415 | 38 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20570.1 | 2e-24 | GBF's pro-rich region-interacting factor 1 |