PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PDK_30s682911g001

Organism

Phoenix dactylifera

Taxonomic ID

42345

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix

Family

Trihelix

Protein Properties

Length: 275aa MW: 31829.8 Da PI: 5.6156

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PDK_30s682911g001	genome	PDK	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	61.3	2.3e-19	140	217	6	86
trihelix 6 evlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 e +i ++ +++++l++ g +k+ lWee+s++m+ g+ s+k Ck+k+e++n +++k+ke +kkr+ e+++tcpy+++le PDK_30s682911g001 140 E---IIGLKASIKSKLQEgGHAKGDLWEEISAAMACLGYDPSSKGCKDKLEEINDYFRKTKECNKKRR-ENKRTCPYYKNLE 217 4...57778889999998457899****************************************95.5667****998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.8E-13	135	218	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 275 aa Download sequence Send to blast
MEKGTRSFKR SRNSWQSKIK EFVDIQVRRF MEVQEAWLEK MLNTLEQMEQ ERISREEAWR 60 KQEAARLDRE YRLWASEKAW IEARDSAIME ALEKISRREM KPQFREFASI GILEGDVNHN 120 GMESEIAHGN LSSRRWLDSE IIGLKASIKS KLQEGGHAKG DLWEEISAAM ACLGYDPSSK 180 GCKDKLEEIN DYFRKTKECN KKRRENKRTC PYYKNLESSD GQRGKEDCYE DVGQAAETVD 240 PQPSNGTSSS NGDLIGCLDC CFRLLISEKE FVGEQ

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_008813676.1	0.0	trihelix transcription factor PTL-like
TrEMBL	A0A2H3ZGY6	0.0	A0A2H3ZGY6_PHODC; trihelix transcription factor PTL-like
STRING	XP_008813676.1	0.0	(Phoenix dactylifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP22922	6	6

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-30	Trihelix family protein