PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s680571g003
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family NAC
Protein Properties Length: 305aa    MW: 34078.3 Da    PI: 4.555
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s680571g003genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.22.8e-181461149
                NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                       + pGfrFhPtdeelv +yLk+k+++k+l++ e i+++diyk++PwdLp+
  PDK_30s680571g003 14 MLPGFRFHPTDEELVGFYLKRKIQQKPLSV-ELIRQLDIYKFDPWDLPS 61
                       579***************************.89**************94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-18963IPR003441NAC domain
PROSITE profilePS5100513.96114162IPR003441NAC domain
PfamPF023657.0E-91686IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MDERSDMDKG DEVMLPGFRF HPTDEELVGF YLKRKIQQKP LSVELIRQLD IYKFDPWDLP  60
SDSWAICRIF KKTNSMAQRA LSHSWVSPLP ETNEQDLFSA SQTARGTQFC SENISRMTEA  120
GSAIQFGCNN SFQQQACTTS YSPLDVTSYK PIDQISCKPS QFFPVSSAEM PTNFMFSPAE  180
VSIPSKCTVD VAAMLLNISP TILGDVEKAS ESIAYGQTQQ FNGFTVDFPL DMSTSLGSGE  240
EEMYAKKTAH ICNVNNNQLG AGKTVSFPFS LQSNLSDEWK PNLPWDSPPC PSEMPKSYST  300
NKCYT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-12163164Stress-induced transcription factor NAC1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008784123.11e-178protein FEZ-like
TrEMBLA0A2H3XI111e-176A0A2H3XI11_PHODC; protein FEZ-like
STRINGXP_008784123.11e-177(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP33663882
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26870.18e-26NAC family protein