PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PDK_30s679311g001
Organism
Phoenix dactylifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Coryphoideae; Phoeniceae; Phoenix
Family G2-like
Protein Properties Length: 207aa    MW: 22631.2 Da    PI: 8.4067
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PDK_30s679311g001genomePDKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like51.22.8e-1646752655
            G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                        AtPk +l++m+v+gLt++hvkSHLQkYRl
  PDK_30s679311g001 46 GATPKGVLRVMGVQGLTIYHVKSHLQKYRL 75
                       59***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.97E-64475IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-114676IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.0E-154676IPR009057Homeodomain-like
PfamPF143794.1E-8119144IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MEGDTFFSSE ALFAGQNRAL GRDYETPFTA NNTSDKNQSP PLSETGATPK GVLRVMGVQG  60
LTIYHVKSHL QKYRLAKYIP ESSSDGTKSE KKEPGDLLST IDNSSKSIDL SESYNELSKV  120
QRQLQLRIQA QGKYLKKIVE EQQRLSCVLT GASGLGNTAT TSGNPNLDSD KTDPPTPAST  180
SDIPIQDKGI FSFTDENARI NVLKKRV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008796527.12e-85myb family transcription factor PHL7-like
SwissprotQ9SJW09e-49PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2H3YBZ13e-84A0A2H3YBZ1_PHODC; myb family transcription factor PHL7-like
STRINGXP_008796527.16e-85(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79133343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.14e-51G2-like family protein